C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADAMTS-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070469 Adamtsl3 10090 + 7:82335694-82614450 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000172490 Adamtsl3-004 82335694-82340024 processed_transcript
  ENSMUST00000172784 Adamtsl3-003 82611777-82612774 protein_coding
  ENSMUST00000173287 Adamtsl3-001 82335732-82614450 protein_coding
  ENSMUST00000173828 Adamtsl3-005 82337218-82612430 protein_coding
  ENSMUST00000174495 Adamtsl3-002 82408474-82465844 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000172490ENSMUST00000172784ENSMUST00000173287ENSMUST00000173828ENSMUST00000174495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000172490 N/A 0.584±0.05 N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A 1.011±0.00 N/A N/A
ENSMUST00000172784 N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.02 N/A N/A N/A 0.114±0.05 N/A
ENSMUST00000173287 1.099±0.64 0.245±0.05 4.977±0.28 0.135±0.02 0.563±0.17 0.845±0.29 0.925±0.36 0.144±0.08 0.013±0.01 1.870±0.20 0.168±0.09 0.627±0.14 0.023±0.01 0.176±0.01
ENSMUST00000173828 N/A 0.263±0.11 N/A N/A N/A N/A N/A N/A 0.029±0.02 N/A N/A 0.215±0.00 0.051±0.00 0.183±0.00
ENSMUST00000174495 N/A N/A N/A 0.347±0.00 N/A N/A N/A N/A N/A N/A N/A 0.604±0.00 0.061±0.02 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U9 CIL_0007U9_0002 VISTA 7:82082717-82683985
CIL_000406 CIL_000406_0002 CGP 7:82173840-82614450

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027903 ADAMTSL3 ADAMTS-like 3 protein_coding Danio_rerio
ENSG00000156218 ADAMTSL3 ADAMTS-like 3 protein_coding Homo_sapiens

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