C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007U9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1514 VISTA 9606 15:83407808-84009696
GeneTranscriptPositionBiotype
ENSG00000140600 (SH3GL3)
SH3-domain GRB2-like 3 		ENST00000324537 (SH3GL3-001) 83447531-83618739 protein_coding
ENST00000427482 (SH3GL3-002) 83447228-83618743 protein_coding
ENST00000467735 (SH3GL3-004) 83609403-83618305 processed_transcript
ENST00000492099 (SH3GL3-003) 83447228-83565883 retained_intron
ENST00000563901 (SH3GL3-005) 83447376-83618739 nonsense_mediated_decay
ENST00000564054 (SH3GL3-006) 83609270-83618642 processed_transcript
ENSG00000156218 (ADAMTSL3)
ADAMTS-like 3 		ENST00000286744 (ADAMTSL3-001) 83654086-84039842 protein_coding
ENST00000561483 (ADAMTSL3-003) 83654095-84025551 retained_intron
ENST00000562296 (ADAMTSL3-007) 83945735-83982489 processed_transcript
ENST00000565653 (ADAMTSL3-004) 83694294-83819979 processed_transcript
ENST00000567476 (ADAMTSL3-002) 83654088-84039427 protein_coding
ENST00000567663 (ADAMTSL3-005) 83870912-83891065 processed_transcript
ENST00000567716 (ADAMTSL3-006) 83945756-83982305 processed_transcript
ENST00000569510 (ADAMTSL3-008) 83654095-83862935 retained_intron
ENSG00000221484 (AC027807.1)
 ENST00000408557 (AC027807.1-201) 83989233-83989345 miRNA
ENSG00000259986 (RP11-382A20.4)
 ENST00000561498 (RP11-382A20.4-002) 83180802-83184796 antisense
ENST00000565495 (RP11-382A20.4-003) 83184805-83439445 antisense
ENST00000568634 (RP11-382A20.4-001) 83179182-83186068 antisense
ENSG00000261665 (TUBA8P2)
tubulin, alpha 8 pseudogene 2 		ENST00000569261 (TUBA8P2-001) 83739784-83740199 transcribed_processed_pseudogene
ENSG00000274128 (RP11-342A23.2)
 ENST00000616099 (RP11-342A23.2-001) 83962176-83962583 sense_intronic
CIL_0007U9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1514 VISTA 10090 7:82082717-82683985
GeneTranscriptPositionBiotype
ENSMUSG00000030638 (Sh3gl3)
SH3-domain GRB2-like 3 		ENSMUST00000032874 (Sh3gl3-001) 82174796-82307419 protein_coding
ENSMUST00000177883 (Sh3gl3-005) 82174856-82307419 nonsense_mediated_decay
ENSMUST00000177895 (Sh3gl3-006) 82174950-82307419 nonsense_mediated_decay
ENSMUST00000178526 (Sh3gl3-008) 82270886-82307228 protein_coding
ENSMUST00000179150 (Sh3gl3-004) 82175234-82176292 processed_transcript
ENSMUST00000179318 (Sh3gl3-002) 82173840-82307087 protein_coding
ENSMUST00000179800 (Sh3gl3-009) 82174842-82270038 retained_intron
ENSMUST00000180183 (Sh3gl3-007) 82174195-82284095 protein_coding
ENSMUST00000180243 (Sh3gl3-003) 82175156-82284158 protein_coding
ENSMUSG00000038563 (Eftud1)
elongation factor Tu GTP binding domain containing 1 		ENSMUST00000039881 (Eftud1-001) 82648641-82777852 protein_coding
ENSMUST00000125245 (Eftud1-002) 82648629-82698684 retained_intron
ENSMUST00000141726 (Eftud1-003) 82648614-82674555 protein_coding
ENSMUST00000153265 (Eftud1-004) 82670229-82674544 processed_transcript
ENSMUST00000179489 (Eftud1-201) 82648614-82777852 protein_coding
ENSMUSG00000038570 (Fam154b)
family with sequence similarity 154, member B 		ENSMUST00000056728 (Fam154b-001) 82632960-82648523 protein_coding
ENSMUST00000126478 (Fam154b-003) 82646168-82648528 processed_transcript
ENSMUST00000151632 (Fam154b-002) 82642141-82648528 retained_intron
ENSMUST00000156720 (Fam154b-004) 82635288-82648523 processed_transcript
ENSMUSG00000070469 (Adamtsl3)
ADAMTS-like 3 		ENSMUST00000172490 (Adamtsl3-004) 82335694-82340024 processed_transcript
ENSMUST00000172784 (Adamtsl3-003) 82611777-82612774 protein_coding
ENSMUST00000173287 (Adamtsl3-001) 82335732-82614450 protein_coding
ENSMUST00000173828 (Adamtsl3-005) 82337218-82612430 protein_coding
ENSMUST00000174495 (Adamtsl3-002) 82408474-82465844 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007U9_0001ENSG00000140600ENST00000324537ENST00000427482ENST00000467735ENST00000492099ENST00000563901ENST00000564054ENSG00000156218ENST00000286744ENST00000561483ENST00000562296ENST00000565653ENST00000567476ENST00000567663ENST00000567716ENST00000569510ENSG00000221484ENST00000408557ENSG00000259986ENST00000561498ENST00000565495ENST00000568634ENSG00000261665ENST00000569261ENSG00000274128ENST00000616099CIL_0007U9_0002ENSMUSG00000030638ENSMUST00000032874ENSMUST00000177883ENSMUST00000177895ENSMUST00000178526ENSMUST00000179150ENSMUST00000179318ENSMUST00000179800ENSMUST00000180183ENSMUST00000180243ENSMUSG00000038563ENSMUST00000039881ENSMUST00000125245ENSMUST00000141726ENSMUST00000153265ENSMUST00000179489ENSMUSG00000038570ENSMUST00000056728ENSMUST00000126478ENSMUST00000151632ENSMUST00000156720ENSMUSG00000070469ENSMUST00000172490ENSMUST00000172784ENSMUST00000173287ENSMUST00000173828ENSMUST00000174495
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007U9_0001ENSG00000140600ENST00000324537ENST00000427482ENST00000467735ENST00000492099ENST00000563901ENST00000564054ENSG00000156218ENST00000286744ENST00000561483ENST00000562296ENST00000567476ENST00000569510ENSG00000221484ENST00000408557ENSG00000259986ENST00000561498ENST00000565495ENST00000568634ENSG00000261665ENST00000569261ENSG00000274128ENST00000616099CIL_0007U9_0002ENSMUSG00000030638ENSMUST00000032874ENSMUST00000177883ENSMUST00000177895ENSMUST00000178526ENSMUST00000179318ENSMUST00000179800ENSMUST00000180183ENSMUST00000180243ENSMUSG00000038563ENSMUST00000039881ENSMUST00000125245ENSMUST00000141726ENSMUST00000153265ENSMUST00000179489ENSMUSG00000038570ENSMUST00000056728ENSMUST00000126478ENSMUST00000151632ENSMUST00000156720ENSMUSG00000070469ENSMUST00000172490ENSMUST00000172784ENSMUST00000173287ENSMUST00000173828ENSMUST00000174495
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140600 ENST00000324537 0.011±0.00 0.057±0.00 N/A N/A 0.005±0.00 0.045±0.00 0.016±0.00 0.200±0.00 0.161±0.13 0.132±0.00 0.047±0.00 0.088±0.04 N/A N/A
ENST00000427482 N/A N/A N/A 13.166±0.17 N/A 0.134±0.00 N/A N/A 0.780±0.00 N/A N/A 0.513±0.16 0.115±0.00 5.366±0.00
ENST00000467735 N/A N/A N/A N/A N/A N/A N/A 0.716±0.00 N/A N/A 0.305±0.00 N/A N/A N/A
ENST00000492099 N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000563901 N/A N/A N/A 17.450±6.74 N/A N/A N/A 0.447±0.00 N/A 0.532±0.39 N/A 0.099±0.06 0.918±0.74 7.578±0.00
ENST00000564054 N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.194±0.00 N/A 15.469±7.93
ENSG00000156218 ENST00000286744 0.211±0.00 0.723±0.00 N/A 0.120±0.04 0.681±0.00 1.218±0.00 0.422±0.00 0.485±0.00 0.862±0.00 2.117±0.75 N/A 0.647±0.38 1.128±0.72 1.801±0.00
ENST00000561483 N/A N/A 0.718±0.00 0.465±0.00 1.372±0.00 0.416±0.00 1.395±0.00 3.058±0.00 3.025±0.00 N/A N/A 0.501±0.00 N/A N/A
ENST00000562296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.746±0.00 N/A N/A
ENST00000565653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567476 0.861±0.00 N/A N/A 0.212±0.10 0.549±0.17 3.093±0.00 2.442±0.00 0.960±0.00 1.295±0.00 4.166±0.00 0.201±0.00 0.130±0.00 1.125±0.27 1.268±0.12
ENST00000567663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569510 0.657±0.00 2.026±0.00 N/A 1.781±0.00 1.314±0.15 0.747±0.00 1.837±0.00 0.844±0.00 N/A N/A 0.186±0.00 0.855±0.42 1.146±0.00 2.429±1.22
ENSG00000221484 ENST00000408557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.459±0.00 N/A N/A
ENSG00000259986 ENST00000561498 0.403±0.00 0.754±0.00 0.660±0.00 0.231±0.00 0.369±0.00 0.500±0.00 0.276±0.13 0.317±0.00 N/A 0.546±0.00 0.266±0.00 0.470±0.38 N/A 0.169±0.02
ENST00000565495 0.533±0.00 2.488±0.00 N/A 0.690±0.00 1.150±0.00 0.311±0.00 0.787±0.00 0.993±0.00 0.311±0.00 0.100±0.00 0.506±0.00 4.688±0.00 N/A 0.218±0.00
ENST00000568634 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00
ENSG00000261665 ENST00000569261 N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A 0.770±0.00 N/A N/A N/A 0.096±0.00 0.104±0.00
ENSG00000274128 ENST00000616099 0.169±0.00 0.280±0.00 N/A 0.044±0.00 0.116±0.00 0.509±0.00 0.249±0.00 N/A 0.125±0.00 N/A N/A 0.060±0.00 0.106±0.00 0.230±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030638 ENSMUST00000032874 0.962±0.02 0.336±0.14 7.606±0.31 6.178±1.18 0.264±0.05 1.290±0.00 0.131±0.00 0.153±0.00 0.026±0.01 0.241±0.09 0.047±0.00 0.479±0.35 0.354±0.12 23.784±2.66
ENSMUST00000177883 N/A 0.817±0.36 N/A N/A 0.270±0.16 0.870±0.00 0.314±0.17 0.079±0.02 0.030±0.00 N/A 0.036±0.00 0.468±0.34 0.569±0.00 N/A
ENSMUST00000177895 0.202±0.02 N/A 6.658±0.39 11.267±8.33 0.259±0.10 0.460±0.00 0.288±0.00 0.257±0.06 0.050±0.01 0.219±0.00 0.114±0.05 0.786±0.21 0.400±0.16 23.924±15.26
ENSMUST00000178526 N/A N/A N/A N/A 0.511±0.00 N/A N/A 0.114±0.02 N/A 0.296±0.02 0.025±0.00 0.301±0.00 N/A N/A
ENSMUST00000179150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179318 N/A 0.197±0.10 N/A N/A 0.131±0.01 N/A N/A N/A N/A N/A N/A 0.530±0.04 0.209±0.00 23.087±23.42
ENSMUST00000179800 0.489±0.07 0.116±0.07 N/A N/A 0.071±0.03 0.113±0.08 0.047±0.01 N/A 0.018±0.00 0.057±0.03 0.022±0.00 0.241±0.17 0.097±0.00 5.639±0.99
ENSMUST00000180183 0.129±0.00 N/A N/A N/A N/A N/A 0.143±0.00 0.066±0.00 0.104±0.00 0.159±0.00 N/A 0.720±0.00 0.190±0.00 105.108±0.00
ENSMUST00000180243 N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 0.076±0.00 0.544±0.50 N/A N/A
ENSMUSG00000038563 ENSMUST00000039881 1.991±0.72 0.888±0.04 2.117±0.36 2.096±0.45 1.186±0.20 1.840±0.30 0.644±0.13 1.757±0.39 1.587±0.63 1.819±0.86 1.408±0.69 2.703±1.84 2.696±1.30 4.526±0.34
ENSMUST00000125245 N/A 0.462±0.13 N/A N/A 0.432±0.04 N/A N/A N/A N/A N/A N/A 1.105±0.00 N/A N/A
ENSMUST00000141726 3.415±0.00 N/A N/A N/A 2.875±1.19 1.987±0.04 0.872±0.11 N/A N/A N/A N/A 4.041±1.25 N/A N/A
ENSMUST00000153265 N/A 1.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.029±0.00 N/A
ENSMUST00000179489 1.269±0.55 0.691±0.09 1.110±0.37 1.229±0.53 1.058±0.48 0.991±0.78 0.545±0.23 0.923±0.27 0.672±0.21 0.796±0.24 1.378±0.55 1.928±0.94 1.191±0.54 10.620±0.00
ENSMUSG00000038570 ENSMUST00000056728 0.069±0.05 0.102±0.03 0.126±0.00 0.271±0.18 0.167±0.04 0.057±0.01 0.074±0.05 0.215±0.06 0.052±0.03 1.861±0.30 0.064±0.02 0.840±0.48 0.061±0.03 N/A
ENSMUST00000126478 1.525±1.01 0.758±0.36 1.755±0.21 2.766±1.49 1.092±0.32 0.290±0.08 1.357±0.15 1.439±0.28 0.335±0.27 2.571±1.00 1.317±0.71 2.720±1.13 0.160±0.00 99.727±46.54
ENSMUST00000151632 0.062±0.02 N/A 0.143±0.00 0.160±0.07 0.064±0.00 N/A N/A N/A 0.041±0.02 N/A 0.027±0.00 N/A 0.038±0.02 0.167±0.00
ENSMUST00000156720 N/A N/A N/A N/A 0.522±0.00 0.280±0.10 N/A 0.567±0.00 0.134±0.00 N/A N/A 0.880±0.14 N/A N/A
ENSMUSG00000070469 ENSMUST00000172490 N/A 0.584±0.05 N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A 1.011±0.00 N/A N/A
ENSMUST00000172784 N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.02 N/A N/A N/A 0.114±0.05 N/A
ENSMUST00000173287 1.099±0.64 0.245±0.05 4.977±0.28 0.135±0.02 0.563±0.17 0.845±0.29 0.925±0.36 0.144±0.08 0.013±0.01 1.870±0.20 0.168±0.09 0.627±0.14 0.023±0.01 0.176±0.01
ENSMUST00000173828 N/A 0.263±0.11 N/A N/A N/A N/A N/A N/A 0.029±0.02 N/A N/A 0.215±0.00 0.051±0.00 0.183±0.00
ENSMUST00000174495 N/A N/A N/A 0.347±0.00 N/A N/A N/A N/A N/A N/A N/A 0.604±0.00 0.061±0.02 N/A

Loading