C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAMTS-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173287 Adamtsl3-001 ENSMUSG00000070469 10090 + 7:82335732-82614450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173287
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173287 1.099±0.64 0.245±0.05 4.977±0.28 0.135±0.02 0.563±0.17 0.845±0.29 0.925±0.36 0.144±0.08 0.013±0.01 1.870±0.20 0.168±0.09 0.627±0.14 0.023±0.01 0.176±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U9 CIL_0007U9_0002 VISTA 7:82082717-82683985
CIL_000406 CIL_000406_0002 CGP 7:82173840-82614450

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286744 ADAMTSL3-001 protein_coding Homo_sapiens 0 4916
ENST00000561483 ADAMTSL3-003 retained_intron Homo_sapiens 0 4542
ENST00000565653 ADAMTSL3-004 processed_transcript Homo_sapiens 0 545
ENST00000567476 ADAMTSL3-002 protein_coding Homo_sapiens 0 4759
ENST00000569510 ADAMTSL3-008 retained_intron Homo_sapiens 0 811

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