C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 1700049G17 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129341 1700049G17Rik-005 ENSMUSG00000070709 10090 - 7:27911996-27927511 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryPlacentaENSMUST00000129341
Transcript ID Liver Ovary Placenta
ENSMUST00000129341 0.239±0.00 1.354±0.00 0.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UL CIL_0003UL_0007 CGP 7:27907392-27975368

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301310 ZNF582-003 protein_coding Homo_sapiens 2e-18 99
ENST00000586929 ZNF582-001 protein_coding Homo_sapiens 2e-18 99
ENST00000587778 ZNF582-004 non_stop_decay Homo_sapiens 6e-19 99
ENST00000589143 ZNF582-005 protein_coding Homo_sapiens 5e-19 99
ENST00000589895 ZNF582-007 protein_coding Homo_sapiens 4e-19 99
ENST00000593145 ZNF582-002 non_stop_decay Homo_sapiens 6e-19 99
ENST00000619584 ZNF582-201 protein_coding Homo_sapiens 2e-18 99

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