C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA B230216G23 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071112 B230216G23Rik 10090 + 6:142413441-142419730 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088263 B230216G23Rik-201 142413441-142419730 protein_coding
  ENSMUST00000123209 B230216G23Rik-002 142414521-142419730 retained_intron
  ENSMUST00000126521 B230216G23Rik-001 142413833-142418571 protein_coding
  ENSMUST00000141548 B230216G23Rik-003 142414012-142419730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088263ENSMUST00000123209ENSMUST00000126521ENSMUST00000141548
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088263 0.247±0.06 0.074±0.01 0.117±0.00 1.699±0.96 0.279±0.00 0.313±0.10 N/A N/A N/A 0.397±0.11 0.037±0.00 0.122±0.00 0.437±0.06 0.193±0.00
ENSMUST00000123209 0.063±0.00 0.215±0.05 N/A 0.115±0.00 0.138±0.00 0.200±0.04 N/A N/A 0.150±0.00 0.124±0.00 N/A 0.194±0.10 0.273±0.18 0.117±0.00
ENSMUST00000126521 N/A 0.139±0.02 N/A N/A N/A 0.483±0.00 N/A N/A N/A N/A 0.277±0.00 0.394±0.00 N/A N/A
ENSMUST00000141548 0.299±0.18 0.244±0.15 N/A 1.816±0.34 0.254±0.16 0.306±0.25 0.099±0.05 0.107±0.06 0.101±0.05 0.305±0.13 0.053±0.03 0.263±0.14 0.171±0.06 0.206±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0002 VISTA 6:142366341-142969080
CIL_0006XW CIL_0006XW_0003 CGP 6:142387221-142419730
CIL_0006XY CIL_0006XY_0003 CGP 6:142413441-142473109

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003084 ISS positive regulation of systemic arterial blood pressure
GO:0005184 ISS neuropeptide hormone activity
GO:0005615 ISS extracellular space
GO:0010459 ISS negative regulation of heart rate
GO:0031410 IEA cytoplasmic vesicle
GO:0031765 ISS type 2 galanin receptor binding
GO:0031766 ISS type 3 galanin receptor binding
GO:0032099 IDA negative regulation of appetite
GO:0035814 ISS negative regulation of renal sodium excretion
GO:0044539 IDA long-chain fatty acid import
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0051930 ISS regulation of sensory perception of pain

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056859 SPX spexin hormone protein_coding Danio_rerio
ENSG00000134548 SPX spexin hormone protein_coding Homo_sapiens

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