C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006XY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056859-ENSDARG00000004904 CGP 7955 4:15862602-15892415
GeneTranscriptPositionBiotype
ENSDARG00000004904 (gys2)
glycogen synthase 2
ENSDART00000014007 (gys2-001) 15868483-15892415 protein_coding
ENSDARG00000056859 (SPX)
spexin hormone
ENSDART00000079429 (SPX-201) 15862602-15868415 protein_coding
ENSDART00000132337 (SPX-001) 15863872-15865669 protein_coding
CIL_0006XY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134548-ENSG00000111713 CGP 9606 12:21526307-21604847
GeneTranscriptPositionBiotype
ENSG00000111713 (GYS2)
glycogen synthase 2 (liver)
ENST00000261195 (GYS2-001) 21536189-21604847 protein_coding
ENSG00000134548 (SPX)
spexin hormone
ENST00000256969 (SPX-001) 21526307-21532947 protein_coding
ENST00000535033 (SPX-005) 21527044-21532523 retained_intron
ENST00000535139 (SPX-002) 21527435-21532523 retained_intron
ENST00000537527 (SPX-007) 21527952-21537377 processed_transcript
ENST00000543800 (SPX-003) 21527936-21532523 processed_transcript
ENST00000544637 (SPX-006) 21527301-21531524 processed_transcript
ENST00000546199 (SPX-004) 21527131-21531485 nonsense_mediated_decay
CIL_0006XY_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000071112-ENSMUSG00000030244 CGP 10090 6:142413441-142473109
GeneTranscriptPositionBiotype
ENSMUSG00000030244 (Gys2)
glycogen synthase 2
ENSMUST00000032371 (Gys2-001) 142422613-142473109 protein_coding
ENSMUST00000126939 (Gys2-002) 142422617-142423619 processed_transcript
ENSMUSG00000071112 (B230216G23Rik)
RIKEN cDNA B230216G23 gene
ENSMUST00000088263 (B230216G23Rik-201) 142413441-142419730 protein_coding
ENSMUST00000123209 (B230216G23Rik-002) 142414521-142419730 retained_intron
ENSMUST00000126521 (B230216G23Rik-001) 142413833-142418571 protein_coding
ENSMUST00000141548 (B230216G23Rik-003) 142414012-142419730 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XY_0001ENSDARG00000004904ENSDART00000014007ENSDARG00000056859ENSDART00000079429ENSDART00000132337CIL_0006XY_0002ENSG00000111713ENST00000261195ENSG00000134548ENST00000256969ENST00000535033ENST00000535139ENST00000537527ENST00000543800ENST00000544637ENST00000546199CIL_0006XY_0003ENSMUSG00000030244ENSMUST00000032371ENSMUST00000126939ENSMUSG00000071112ENSMUST00000088263ENSMUST00000123209ENSMUST00000126521ENSMUST00000141548
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006XY_0001ENSDARG00000004904ENSDART00000014007ENSDARG00000056859ENSDART00000079429ENSDART00000132337CIL_0006XY_0002ENSG00000111713ENST00000261195ENSG00000134548ENST00000256969ENST00000535033ENST00000535139ENST00000543800ENST00000544637ENST00000546199CIL_0006XY_0003ENSMUSG00000030244ENSMUST00000032371ENSMUST00000126939ENSMUSG00000071112ENSMUST00000088263ENSMUST00000123209ENSMUST00000126521ENSMUST00000141548
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004904 ENSDART00000014007 N/A N/A N/A 0.212±0.12 N/A N/A 0.390±0.03 4.729±0.00 14.188±0.00 N/A 0.568±0.00 N/A N/A N/A
ENSDARG00000056859 ENSDART00000079429 N/A N/A N/A 0.229±0.22 N/A N/A 0.111±0.16 0.094±0.06 0.401±0.00 N/A 0.098±0.00 N/A N/A N/A
ENSDART00000132337 N/A N/A N/A 1.413±0.43 N/A N/A 0.346±0.00 N/A N/A N/A 0.106±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111713 ENST00000261195 0.787±0.00 0.049±0.00 N/A N/A 0.078±0.00 0.087±0.00 N/A 28.081±0.00 17.358±0.00 N/A N/A 0.044±0.01 N/A 0.080±0.02
ENSG00000134548 ENST00000256969 0.854±0.00 0.021±0.00 1.597±0.00 N/A 2.203±0.00 0.241±0.20 N/A N/A N/A N/A N/A 0.058±0.02 1.032±0.47 N/A
ENST00000535033 N/A N/A 1.089±0.00 2.074±0.00 N/A N/A N/A 5.468±0.00 0.500±0.00 N/A N/A N/A 1.702±0.89 N/A
ENST00000535139 1.424±0.00 N/A N/A 7.053±2.89 3.683±0.00 N/A 1.372±0.99 3.546±0.00 N/A 1.423±0.00 0.763±0.28 0.024±0.00 2.173±0.00 0.509±0.00
ENST00000537527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543800 N/A 0.105±0.00 N/A 0.858±0.00 N/A 0.190±0.00 1.403±0.16 N/A N/A N/A N/A 0.062±0.03 N/A 0.506±0.00
ENST00000544637 N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A N/A N/A N/A 1.039±0.00 N/A
ENST00000546199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030244 ENSMUST00000032371 4.882±3.92 1.969±0.81 0.026±0.01 0.012±0.01 1.966±0.94 0.063±0.02 0.318±0.15 3.920±1.48 18.395±10.07 0.293±0.14 0.065±0.02 0.326±0.19 1.166±1.56 0.052±0.02
ENSMUST00000126939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00
ENSMUSG00000071112 ENSMUST00000088263 0.247±0.06 0.074±0.01 0.117±0.00 1.699±0.96 0.279±0.00 0.313±0.10 N/A N/A N/A 0.397±0.11 0.037±0.00 0.122±0.00 0.437±0.06 0.193±0.00
ENSMUST00000123209 0.063±0.00 0.215±0.05 N/A 0.115±0.00 0.138±0.00 0.200±0.04 N/A N/A 0.150±0.00 0.124±0.00 N/A 0.194±0.10 0.273±0.18 0.117±0.00
ENSMUST00000126521 N/A 0.139±0.02 N/A N/A N/A 0.483±0.00 N/A N/A N/A N/A 0.277±0.00 0.394±0.00 N/A N/A
ENSMUST00000141548 0.299±0.18 0.244±0.15 N/A 1.816±0.34 0.254±0.16 0.306±0.25 0.099±0.05 0.107±0.06 0.101±0.05 0.305±0.13 0.053±0.03 0.263±0.14 0.171±0.06 0.206±0.09

Loading