C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 3425401B19 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000071540 3425401B19Rik 10090 - 14:32659119-32685272 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096038 3425401B19Rik-201 32659119-32685272 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096038
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096038 0.076±0.05 0.020±0.00 0.128±0.06 0.025±0.02 1.476±1.87 0.066±0.03 7.634±1.08 0.283±0.16 0.013±0.01 0.421±0.26 31.253±4.12 0.137±0.10 0.283±0.36 0.025±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084A CIL_00084A_0002 VISTA 14:32298253-32899721
CIL_0008ZL CIL_0008ZL_0002 VISTA 14:32470674-33071522
CIL_0007OS CIL_0007OS_0003 UCNEbase 14:32546905-33068248
CIL_0004VW CIL_0004VW_0002 CGP 14:32599407-32685272

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086945 C12H10orf71 (1 of 2) chromosome 10 open reading frame 71 protein_coding Danio_rerio
ENSDARG00000086970 C13H10orf71 (2 of 2) chromosome 10 open reading frame 71 protein_coding Danio_rerio
ENSG00000177354 C10orf71 chromosome 10 open reading frame 71 protein_coding Homo_sapiens

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