C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072214 Sept5 10090 - 16:18621811-18629938 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096987 Sept5-201 18621811-18629938 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096987
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096987 8.183±0.85 3.839±0.26 20.710±0.19 197.607±112.60 6.576±1.31 44.082±3.74 2.129±0.40 1.390±0.17 1.087±1.35 5.611±1.76 1.266±0.16 19.969±2.88 73.400±38.58 19.263±2.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684
CIL_0000RI CIL_0000RI_0002 CGP 16:18620319-18629938
CIL_0000RL CIL_0000RL_0002 CGP 16:18621811-18778260

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005886 ISS plasma membrane
GO:0005938 IDA cell cortex
GO:0007049 IEA cell cycle
GO:0008021 ISS synaptic vesicle
GO:0017157 ISS regulation of exocytosis
GO:0031105 IEA septin complex
GO:0043195 IDA terminal bouton
GO:0043679 IDA axon terminus
GO:0045202 IDA synapse
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013843 sept5a septin 5a protein_coding Danio_rerio
ENSDARG00000036031 sept5b septin 5b protein_coding Danio_rerio
ENSG00000184702 SEPT5 septin 5 protein_coding Homo_sapiens

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