C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184702 SEPT5 9606 + 22:19714464-19724772 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000383045 SEPT5-004 19718432-19722629 protein_coding
  ENST00000395109 SEPT5-009 19719435-19720833 protein_coding
  ENST00000406172 SEPT5-015 19714529-19723319 nonsense_mediated_decay
  ENST00000406395 SEPT5-014 19714504-19723274 protein_coding
  ENST00000412544 SEPT5-008 19714675-19722331 protein_coding
  ENST00000413258 SEPT5-016 19720188-19720874 protein_coding
  ENST00000431044 SEPT5-006 19718469-19724772 nonsense_mediated_decay
  ENST00000431124 SEPT5-010 19717270-19721720 protein_coding
  ENST00000438754 SEPT5-002 19718458-19723319 protein_coding
  ENST00000455784 SEPT5-001 19714464-19723319 protein_coding
  ENST00000455843 SEPT5-003 19717220-19724216 nonsense_mediated_decay
  ENST00000470814 SEPT5-005 19720554-19724224 retained_intron
  ENST00000477238 SEPT5-012 19719530-19720213 retained_intron
  ENST00000480423 SEPT5-013 19720342-19721869 retained_intron
  ENST00000490204 SEPT5-011 19718159-19719055 processed_transcript
  ENST00000622227 SEPT5-201 19714464-19723321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000383045ENST00000395109ENST00000406395ENST00000412544ENST00000413258ENST00000431044ENST00000438754ENST00000455784ENST00000455843ENST00000470814ENST00000480423ENST00000622227
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000383045 1.375±0.00 N/A N/A 45.622±20.78 0.902±0.00 1.447±0.86 11.016±8.04 0.764±0.70 N/A 2.867±2.58 N/A 2.472±1.13 6.830±0.00 13.847±0.00
ENST00000395109 N/A N/A 0.262±0.00 N/A 1.573±0.00 N/A 2.306±0.00 N/A N/A 0.684±0.00 2.526±0.00 2.718±0.00 N/A N/A
ENST00000406395 N/A N/A N/A 49.528±0.00 N/A N/A N/A 2.030±0.00 N/A N/A 0.357±0.00 4.040±0.00 4.074±0.00 6.111±0.00
ENST00000412544 N/A N/A N/A 18.686±0.00 1.768±0.00 N/A 1.405±0.00 0.193±0.00 0.268±0.00 N/A N/A 2.885±0.00 2.651±0.00 12.695±0.00
ENST00000413258 N/A N/A N/A N/A N/A N/A N/A 0.494±0.00 N/A N/A N/A N/A N/A N/A
ENST00000431044 N/A 14.728±0.00 N/A 10.376±0.00 N/A N/A 18.857±0.00 1.525±0.00 N/A 8.430±0.00 N/A 13.372±4.41 3.247±1.01 N/A
ENST00000438754 N/A 7.742±0.00 N/A 10.426±0.00 N/A 2.025±0.00 19.078±17.85 N/A N/A N/A 1.346±0.00 4.528±0.00 4.558±1.02 4.546±0.00
ENST00000455784 2.446±0.00 N/A N/A 41.519±30.28 4.837±0.00 6.506±0.00 11.765±0.00 N/A N/A N/A N/A 6.279±0.00 3.402±0.19 11.207±0.00
ENST00000455843 N/A N/A N/A N/A 1.230±0.00 N/A N/A N/A 0.122±0.00 N/A 0.132±0.00 N/A N/A N/A
ENST00000470814 N/A N/A N/A N/A N/A 2.067±0.00 N/A N/A N/A N/A N/A N/A N/A 4.696±0.00
ENST00000480423 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.029±0.00 N/A N/A N/A N/A
ENST00000622227 0.739±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.781±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532
CIL_00095F CIL_00095F_0001 VISTA 22:19497462-20100487

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 TAS cytokinesis
GO:0003924 IEA GTPase activity
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005886 IDA plasma membrane
GO:0005938 IEA cell cortex
GO:0006184 TAS GTP catabolic process
GO:0007049 IEA cell cycle
GO:0008021 IDA synaptic vesicle
GO:0016080 TAS synaptic vesicle targeting
GO:0017157 IMP regulation of exocytosis
GO:0031105 IEA septin complex
GO:0043195 IEA terminal bouton
GO:0043679 IEA axon terminus
GO:0045202 IEA synapse
GO:2000300 TAS regulation of synaptic vesicle exocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013843 sept5a septin 5a protein_coding Danio_rerio
ENSDARG00000036031 sept5b septin 5b protein_coding Danio_rerio
ENSMUSG00000072214 Sept5 septin 5 protein_coding Mus_musculus

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