C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY (sex determining region Y)-box 5, intronic transcript
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000072677 Sox5it 10090 - 6:144670427-144672720 sense_intronic
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000144026 Sox5it-001 144670427-144672720 sense_intronic

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverLungOvaryPlacentaTestisENSMUST00000144026
Transcript ID Bladder Brain Breast Liver Lung Ovary Placenta Testis
ENSMUST00000144026 0.010±0.00 0.018±0.00 0.136±0.06 0.011±0.00 0.050±0.00 0.217±0.11 0.043±0.00 1.439±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Y0 CIL_0006Y0_0003 CGP 6:143167230-144781977
CIL_0007NR CIL_0007NR_0002 UCNEbase 6:143260703-144754208
CIL_0004XB CIL_0004XB_0002 CGP 6:143828425-145076184
CIL_0008XB CIL_0008XB_0002 VISTA 6:144644642-145246014

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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