C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006Y0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019420-ENSDARG00000011582 CGP 7955 4:15954038-16124134
GeneTranscriptPositionBiotype
ENSDARG00000019420 (etnk1)
ethanolamine kinase 1 		ENSDART00000017726 (etnk1-001) 15954038-15975107 protein_coding
ENSDART00000143208 (etnk1-002) 15966825-15972653 processed_transcript
CIL_0006Y0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139163-ENSG00000134532 CGP 9606 12:22625075-23951032
GeneTranscriptPositionBiotype
ENSG00000115934 (RP11-153K16.2)
 ENST00000538297 (RP11-153K16.2-001) 23181334-23251499 lincRNA
ENSG00000134532 (SOX5)
SRY (sex determining region Y)-box 5 		ENST00000367206 (SOX5-006) 23536530-23950920 nonsense_mediated_decay
ENST00000381381 (SOX5-201) 23532298-23949703 protein_coding
ENST00000396007 (SOX5-001) 23534034-23584612 protein_coding
ENST00000441133 (SOX5-004) 23762475-23951020 protein_coding
ENST00000451604 (SOX5-002) 23532352-23949703 protein_coding
ENST00000535530 (SOX5-014) 23563316-23738506 processed_transcript
ENST00000536629 (SOX5-015) 23575813-23738506 processed_transcript
ENST00000536850 (SOX5-011) 23920038-23949592 processed_transcript
ENST00000536911 (SOX5-013) 23603921-23734715 retained_intron
ENST00000537393 (SOX5-008) 23533683-23949647 protein_coding
ENST00000538083 (SOX5-010) 23845991-23944352 protein_coding
ENST00000541536 (SOX5-009) 23533787-23896027 protein_coding
ENST00000541847 (SOX5-016) 23740851-23950907 protein_coding
ENST00000542241 (SOX5-012) 23575659-23632194 processed_transcript
ENST00000545921 (SOX5-007) 23534048-23951032 protein_coding
ENST00000546136 (SOX5-003) 23529500-23896026 protein_coding
ENSG00000139163 (ETNK1)
ethanolamine kinase 1 		ENST00000266517 (ETNK1-001) 22625075-22690665 protein_coding
ENST00000335148 (ETNK1-002) 22625141-22644587 protein_coding
ENST00000538218 (ETNK1-006) 22625192-22685223 protein_coding
ENST00000539974 (ETNK1-004) 22643889-22661228 retained_intron
ENST00000544191 (ETNK1-003) 22671086-22684551 retained_intron
ENST00000545979 (ETNK1-005) 22625357-22626200 protein_coding
ENSG00000241451 (RPS27P22)
ribosomal protein S27 pseudogene 22 		ENST00000478056 (RPS27P22-001) 22722229-22722469 processed_pseudogene
ENSG00000256321 (RP11-153K16.1)
 ENST00000534841 (RP11-153K16.1-003) 23175642-23188519 lincRNA
ENST00000541288 (RP11-153K16.1-001) 23099368-23188538 lincRNA
ENST00000545400 (RP11-153K16.1-002) 23175648-23191587 lincRNA
ENSG00000256473 (RP11-437F6.1)
 ENST00000546118 (RP11-437F6.1-001) 23637973-23638487 antisense
ENSG00000256923 (RP11-449P1.1)
 ENST00000537293 (RP11-449P1.1-001) 22742582-22743091 lincRNA
ENSG00000256995 (RP11-114G22.1)
 ENST00000413794 (RP11-114G22.1-001) 22699859-22888043 lincRNA
ENST00000536744 (RP11-114G22.1-002) 22699941-22888933 lincRNA
ENST00000538317 (RP11-114G22.1-003) 22859475-22971008 lincRNA
ENST00000540895 (RP11-114G22.1-004) 22964572-23174123 lincRNA
ENST00000540994 (RP11-114G22.1-005) 23021787-23054241 lincRNA
ENST00000590328 (RP11-114G22.1-006) 22787043-22888021 lincRNA
ENST00000590955 (RP11-114G22.1-008) 22859165-22888021 lincRNA
ENST00000593117 (RP11-114G22.1-007) 22859531-22888021 lincRNA
ENSG00000274885 (RP11-268P4.6)
 ENST00000612441 (RP11-268P4.6-001) 22638464-22638943 sense_intronic
CIL_0006Y0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030275-ENSMUSG00000041540 CGP 10090 6:143167230-144781977
GeneTranscriptPositionBiotype
ENSMUSG00000030275 (Etnk1)
ethanolamine kinase 1 		ENSMUST00000032413 (Etnk1-201) 143167230-143208542 protein_coding
ENSMUSG00000041540 (Sox5)
SRY (sex determining region Y)-box 5 		ENSMUST00000038815 (Sox5-001) 143828425-144209480 protein_coding
ENSMUST00000077160 (Sox5-002) 143828425-144209452 protein_coding
ENSMUST00000111746 (Sox5-004) 143839443-143947101 processed_transcript
ENSMUST00000111748 (Sox5-003) 143828425-143947106 protein_coding
ENSMUST00000111749 (Sox5-005) 143828425-144209558 protein_coding
ENSMUST00000124233 (Sox5-010) 143841275-143947088 protein_coding
ENSMUST00000129050 (Sox5-007) 143906572-144204427 retained_intron
ENSMUST00000139478 (Sox5-012) 144116478-144204057 processed_transcript
ENSMUST00000141102 (Sox5-009) 143843739-144781977 retained_intron
ENSMUST00000142294 (Sox5-006) 144021142-144209480 retained_intron
ENSMUST00000144289 (Sox5-013) 143844815-143947097 protein_coding
ENSMUST00000149451 (Sox5-008) 144104452-144781919 processed_transcript
ENSMUST00000150087 (Sox5-011) 144154829-144209568 retained_intron
ENSMUST00000170367 (Sox5-201) 143828425-144209568 protein_coding
ENSMUSG00000072677 (Sox5it)
SRY (sex determining region Y)-box 5, intronic transcript 		ENSMUST00000144026 (Sox5it-001) 144670427-144672720 sense_intronic
ENSMUSG00000072679 (D6Ertd474e)
DNA segment, Chr 6, ERATO Doi 474, expressed 		ENSMUST00000100817 (D6Ertd474e-001) 143245893-143297272 lincRNA
ENSMUST00000159793 (D6Ertd474e-005) 143245888-143249112 lincRNA
ENSMUST00000160188 (D6Ertd474e-004) 143245888-143295708 lincRNA
ENSMUST00000160951 (D6Ertd474e-002) 143286050-143296037 lincRNA
ENSMUST00000161174 (D6Ertd474e-003) 143245893-143296073 lincRNA
ENSMUSG00000084971 (4930579D09Rik)
RIKEN cDNA 4930579D09 gene 		ENSMUST00000132321 (4930579D09Rik-001) 143533965-143535508 lincRNA
ENSMUSG00000085785 (Sox5os3)
SRY (sex determining region Y)-box 5, opposite strand 3 		ENSMUST00000139351 (Sox5os3-001) 144672868-144693834 antisense
ENSMUST00000154167 (Sox5os3-002) 144679702-144693584 antisense
ENSMUSG00000086282 (Sox5os4)
SRY (sex determining region Y)-box 5, opposite strand 4 		ENSMUST00000155562 (Sox5os4-001) 144720911-144759883 antisense
ENSMUSG00000086731 (Sox5os5)
SRY (sex determining region Y)-box 5, opposite strand 5 		ENSMUST00000152192 (Sox5os5-001) 144723565-144724907 antisense
ENSMUSG00000086887 (1700060C16Rik)
RIKEN cDNA 1700060C16 gene 		ENSMUST00000150559 (1700060C16Rik-001) 143593353-143651288 lincRNA
ENSMUSG00000087157 (Sox5os2)
SRY (sex determining region Y)-box 5, opposite strand 2 		ENSMUST00000156443 (Sox5os2-001) 144481225-144501416 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Y0_0001ENSDARG00000019420ENSDART00000017726ENSDART00000143208CIL_0006Y0_0002ENSG00000115934ENST00000538297ENSG00000134532ENST00000367206ENST00000381381ENST00000396007ENST00000441133ENST00000451604ENST00000535530ENST00000536629ENST00000536850ENST00000536911ENST00000537393ENST00000538083ENST00000541536ENST00000541847ENST00000542241ENST00000545921ENST00000546136ENSG00000139163ENST00000266517ENST00000335148ENST00000538218ENST00000539974ENST00000544191ENST00000545979ENSG00000241451ENST00000478056ENSG00000256321ENST00000534841ENST00000541288ENST00000545400ENSG00000256473ENST00000546118ENSG00000256923ENST00000537293ENSG00000256995ENST00000413794ENST00000536744ENST00000538317ENST00000540895ENST00000540994ENST00000590328ENST00000590955ENST00000593117ENSG00000274885ENST00000612441CIL_0006Y0_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006Y0_0001ENSDARG00000019420ENSDART00000017726ENSDART00000143208CIL_0006Y0_0002ENSG00000115934ENST00000538297ENSG00000134532ENST00000367206ENST00000396007ENST00000441133ENST00000451604ENST00000536911ENST00000537393ENST00000541536ENST00000541847ENST00000545921ENST00000546136ENSG00000139163ENST00000266517ENST00000335148ENST00000538218ENSG00000241451ENST00000478056ENSG00000256321ENST00000534841ENST00000541288ENST00000545400ENSG00000256473ENST00000546118ENSG00000256923ENST00000537293ENSG00000256995ENST00000413794ENST00000538317ENST00000540895ENST00000540994ENST00000590328ENSG00000274885ENST00000612441CIL_0006Y0_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019420 ENSDART00000017726 N/A N/A N/A 24.530±12.19 N/A N/A 6.427±2.14 26.070±14.99 0.932±0.00 N/A 5.152±0.00 N/A N/A N/A
ENSDART00000143208 N/A N/A N/A 27.784±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115934 ENST00000538297 0.036±0.00 0.063±0.00 N/A 0.009±0.00 0.026±0.00 0.016±0.00 N/A N/A N/A 0.015±0.00 N/A 0.009±0.00 N/A 0.036±0.01
ENSG00000134532 ENST00000367206 N/A N/A 0.595±0.00 N/A 0.679±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396007 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.229±0.00 N/A N/A N/A 31.087±8.27
ENST00000441133 N/A N/A 1.001±0.00 N/A N/A N/A N/A 13.340±0.00 N/A N/A N/A 3.800±0.00 N/A N/A
ENST00000451604 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A 0.164±0.00 0.436±0.00 N/A
ENST00000535530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536911 N/A N/A N/A N/A N/A N/A 0.784±0.00 N/A N/A N/A N/A 4.359±0.00 N/A N/A
ENST00000537393 N/A N/A N/A 1.297±0.00 0.969±0.00 N/A N/A N/A 2.186±0.00 N/A 0.084±0.00 N/A 0.261±0.00 N/A
ENST00000538083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541536 N/A 0.243±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.747±0.00
ENST00000541847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A N/A N/A
ENST00000542241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A
ENST00000546136 N/A 0.047±0.00 0.159±0.00 0.836±0.00 0.979±0.00 0.607±0.16 0.207±0.03 1.424±1.33 0.534±0.08 0.668±0.00 0.066±0.00 0.269±0.11 0.412±0.17 0.712±0.00
ENSG00000139163 ENST00000266517 2.361±0.00 1.968±0.00 2.609±0.00 7.760±0.58 2.585±0.52 4.450±0.72 1.636±0.55 7.129±0.00 3.201±1.23 7.470±0.24 0.576±0.43 3.699±0.89 1.587±0.21 4.526±0.07
ENST00000335148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.862±0.00 N/A 2.748±0.00 19.225±0.00
ENST00000538218 N/A N/A N/A N/A N/A N/A N/A 2.678±0.00 N/A N/A N/A N/A N/A 7.233±0.00
ENST00000539974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241451 ENST00000478056 0.070±0.00 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256321 ENST00000534841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENST00000541288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00
ENST00000545400 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.054±0.02
ENSG00000256473 ENST00000546118 0.059±0.00 N/A N/A 0.334±0.00 N/A 0.583±0.00 N/A N/A N/A N/A N/A 0.046±0.00 N/A 1.865±0.00
ENSG00000256923 ENST00000537293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A 0.080±0.02
ENSG00000256995 ENST00000413794 N/A N/A N/A 0.088±0.00 0.032±0.00 N/A 0.028±0.00 N/A N/A 0.029±0.00 N/A 0.057±0.01 N/A N/A
ENST00000536744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.318±0.00
ENST00000540895 0.007±0.00 N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A 0.014±0.00 N/A 0.050±0.03 N/A 0.012±0.00
ENST00000540994 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00 0.206±0.00
ENST00000590328 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A
ENST00000590955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274885 ENST00000612441 0.041±0.00 0.163±0.00 1.097±0.00 N/A 0.227±0.00 4.284±0.00 0.210±0.17 0.320±0.15 0.015±0.00 0.039±0.00 0.016±0.00 0.480±0.56 N/A 0.034±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030275 ENSMUST00000032413 18.692±4.89 53.565±9.46 14.819±4.23 27.759±7.86 19.971±10.32 22.202±3.62 7.939±0.39 50.145±6.01 9.368±3.07 29.727±1.69 3.763±0.78 41.775±19.14 7.630±3.05 24.483±9.79
ENSMUSG00000041540 ENSMUST00000038815 N/A N/A 0.354±0.00 3.571±2.44 0.273±0.17 N/A N/A N/A 0.461±0.22 N/A N/A N/A 0.238±0.16 N/A
ENSMUST00000077160 N/A N/A N/A 0.558±0.00 0.203±0.00 N/A 0.098±0.03 N/A N/A N/A N/A 0.762±0.00 0.073±0.00 N/A
ENSMUST00000111746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111748 N/A 0.877±0.05 N/A N/A 0.529±0.00 0.203±0.07 N/A 0.386±0.26 N/A 1.617±0.00 0.076±0.02 2.480±1.01 0.247±0.00 6.947±1.39
ENSMUST00000111749 N/A 0.509±0.00 0.900±0.20 4.518±0.18 N/A 0.153±0.00 0.199±0.04 0.220±0.00 0.435±0.21 N/A 0.019±0.00 N/A 0.590±0.04 N/A
ENSMUST00000124233 N/A N/A N/A 10.133±0.00 N/A N/A N/A N/A N/A N/A 0.203±0.00 8.212±0.00 0.972±0.00 56.394±47.74
ENSMUST00000129050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A
ENSMUST00000141102 N/A N/A 0.580±0.00 N/A 0.365±0.00 N/A N/A 0.293±0.02 0.846±0.00 0.934±0.27 0.033±0.01 2.990±0.00 0.340±0.19 N/A
ENSMUST00000142294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144289 N/A 2.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 63.765±15.75
ENSMUST00000149451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000072677 ENSMUST00000144026 N/A N/A 0.010±0.00 0.018±0.00 0.136±0.06 N/A N/A N/A 0.011±0.00 0.050±0.00 N/A 0.217±0.11 0.043±0.00 1.439±0.24
ENSMUSG00000072679 ENSMUST00000100817 0.020±0.00 N/A 0.012±0.01 0.040±0.00 0.035±0.02 0.082±0.00 0.014±0.00 0.024±0.01 0.009±0.00 0.078±0.01 0.021±0.00 0.168±0.08 0.035±0.01 N/A
ENSMUST00000159793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.819±0.00 0.127±0.00 N/A
ENSMUST00000160188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 0.009±0.00 N/A
ENSMUST00000160951 0.075±0.02 N/A N/A N/A N/A N/A N/A N/A 0.029±0.01 N/A 0.094±0.00 0.326±0.03 0.153±0.06 N/A
ENSMUST00000161174 N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.00 N/A N/A
ENSMUSG00000084971 ENSMUST00000132321 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00 N/A N/A N/A 11.164±2.11
ENSMUSG00000085785 ENSMUST00000139351 0.094±0.04 0.132±0.00 0.009±0.00 N/A 0.074±0.02 N/A 0.035±0.00 0.055±0.02 0.035±0.01 0.061±0.01 N/A 0.224±0.00 N/A 32.151±14.47
ENSMUST00000154167 N/A 0.171±0.02 0.033±0.00 N/A 0.182±0.00 N/A N/A 0.123±0.01 0.021±0.00 0.094±0.00 0.035±0.00 0.188±0.10 N/A N/A
ENSMUSG00000086282 ENSMUST00000155562 N/A 0.353±0.02 N/A N/A 1.153±0.00 N/A N/A 0.188±0.02 1.469±0.00 N/A N/A 0.366±0.09 0.140±0.00 0.491±0.23
ENSMUSG00000086731 ENSMUST00000152192 N/A N/A 0.368±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086887 ENSMUST00000150559 0.110±0.00 N/A N/A N/A 0.069±0.00 N/A N/A 0.129±0.07 0.054±0.02 N/A N/A 0.090±0.00 0.037±0.03 0.620±0.17
ENSMUSG00000087157 ENSMUST00000156443 0.120±0.05 N/A 0.015±0.00 N/A N/A N/A 0.120±0.00 N/A 0.018±0.00 0.088±0.01 N/A N/A N/A N/A

Loading