C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF-hand calcium binding domain 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000073791 Efcab7 10090 + 4:99829198-99912788 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097959 Efcab7-201 99831394-99912610 protein_coding
  ENSMUST00000106994 Efcab7-004 99829500-99831580 protein_coding
  ENSMUST00000124547 Efcab7-003 99829440-99831580 protein_coding
  ENSMUST00000136874 Efcab7-001 99909580-99912788 protein_coding
  ENSMUST00000143994 Efcab7-002 99829198-99831580 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097959ENSMUST00000106994ENSMUST00000124547ENSMUST00000136874ENSMUST00000143994
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097959 0.258±0.07 0.182±0.06 2.078±0.32 1.837±0.38 0.291±0.16 0.248±0.14 0.117±0.05 0.424±0.16 0.946±0.63 0.436±0.14 0.126±0.06 0.812±0.60 1.109±0.42 9.985±5.14
ENSMUST00000106994 3.009±0.00 N/A N/A N/A 2.641±0.00 N/A 1.470±0.00 1.709±0.00 N/A N/A 0.494±0.00 N/A N/A N/A
ENSMUST00000124547 1.341±0.71 0.456±0.04 N/A N/A 0.948±0.15 0.697±0.19 1.380±0.00 0.733±0.11 0.304±0.00 2.728±0.60 N/A N/A N/A N/A
ENSMUST00000136874 0.261±0.00 N/A 1.870±0.31 2.382±0.45 0.359±0.13 0.180±0.00 N/A 0.509±0.00 0.850±0.46 0.758±0.08 0.175±0.06 1.303±0.75 0.875±0.23 N/A
ENSMUST00000143994 0.290±0.00 0.531±0.23 N/A N/A 0.620±0.08 0.436±0.17 0.520±0.21 0.534±0.08 0.121±0.00 0.988±0.23 N/A 0.463±0.12 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AH CIL_0008AH_0002 VISTA 4:99273882-99874766
CIL_0002G7 CIL_0002G7_0002 CGP 4:99715664-99929813
CIL_0002G6 CIL_0002G6_0002 CGP 4:99765402-99929813

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020279 efcab7 EF-hand calcium binding domain 7 protein_coding Danio_rerio
ENSG00000203965 EFCAB7 EF-hand calcium binding domain 7 protein_coding Homo_sapiens

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