C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF-hand calcium binding domain 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143994 Efcab7-002 ENSMUSG00000073791 10090 + 4:99829198-99831580 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000143994
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000143994 0.290±0.00 0.531±0.23 0.620±0.08 0.436±0.17 0.520±0.21 0.534±0.08 0.121±0.00 0.988±0.23 0.463±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AH CIL_0008AH_0002 VISTA 4:99273882-99874766
CIL_0002G7 CIL_0002G7_0002 CGP 4:99715664-99929813
CIL_0002G6 CIL_0002G6_0002 CGP 4:99765402-99929813

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371088 EFCAB7-001 protein_coding Homo_sapiens 4.2039e-45 187
ENST00000480886 EFCAB7-003 processed_transcript Homo_sapiens 1.4013e-45 187

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