C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small VCP/p97-interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074093 Svip 10090 - 7:51997165-52006018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000098414 Svip-201 51997165-52006018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098414 3.480±0.47 3.415±0.56 3.883±0.57 5.417±1.01 1.886±1.28 2.498±0.25 4.512±1.42 4.384±0.36 4.806±1.87 2.326±0.90 10.408±0.46 1.926±1.19 0.448±0.44 15.154±7.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088G CIL_00088G_0002 VISTA 7:51668458-52270961
CIL_0000L8 CIL_0000L8_0002 CGP 7:51862015-52006018
CIL_0003FW CIL_0003FW_0002 CGP 7:51997165-52015728

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000836 IEA Hrd1p ubiquitin ligase complex
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0010508 IEA positive regulation of autophagy
GO:0031333 IEA negative regulation of protein complex assembly
GO:0043621 IEA protein self-association
GO:0070062 IEA extracellular vesicular exosome
GO:1903061 IEA positive regulation of protein lipidation
GO:1903070 IEA negative regulation of ER-associated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000097236 SVIP small VCP/p97-interacting protein protein_coding Danio_rerio
ENSG00000198168 SVIP small VCP/p97-interacting protein protein_coding Homo_sapiens

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