C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003FW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198168-ENSG00000255359 CGP 9606 11:22813799-22860426
GeneTranscriptPositionBiotype
ENSG00000198168 (SVIP)
small VCP/p97-interacting protein 		ENST00000354193 (SVIP-001) 22818929-22829865 protein_coding
ENST00000525670 (SVIP-005) 22813799-22827877 processed_transcript
ENST00000529848 (SVIP-002) 22827245-22830299 processed_transcript
ENST00000530199 (SVIP-004) 22822867-22829373 processed_transcript
ENST00000533774 (SVIP-003) 22822747-22829571 processed_transcript
ENSG00000255359 (CCDC179)
coiled-coil domain containing 179 		ENST00000529466 (CCDC179-002) 22847379-22858152 retained_intron
ENST00000532798 (CCDC179-001) 22846931-22860426 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003FW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074093-ENSMUSG00000094445 CGP 10090 7:51997165-52015728
GeneTranscriptPositionBiotype
ENSMUSG00000074093 (Svip)
small VCP/p97-interacting protein 		ENSMUST00000098414 (Svip-201) 51997165-52006018 protein_coding
ENSMUSG00000094445 (1700015G11Rik)
RIKEN cDNA 1700015G11 gene 		ENSMUST00000180038 (1700015G11Rik-001) 52011683-52015728 protein_coding
ENSMUST00000185758 (1700015G11Rik-003) 52011685-52015703 protein_coding
ENSMUST00000185841 (1700015G11Rik-004) 52011690-52015682 protein_coding
ENSMUST00000190307 (1700015G11Rik-002) 52011687-52015695 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003FW_0001ENSG00000198168ENST00000354193ENST00000525670ENST00000529848ENST00000530199ENST00000533774ENSG00000255359ENST00000529466ENST00000532798CIL_0003FW_0002ENSMUSG00000074093ENSMUST00000098414ENSMUSG00000094445ENSMUST00000180038ENSMUST00000185758ENSMUST00000185841ENSMUST00000190307
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003FW_0001ENSG00000198168ENST00000354193ENST00000525670ENST00000529848ENST00000530199ENST00000533774ENSG00000255359ENST00000529466ENST00000532798CIL_0003FW_0002ENSMUSG00000074093ENSMUST00000098414ENSMUSG00000094445ENSMUST00000180038ENSMUST00000185758ENSMUST00000185841ENSMUST00000190307
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000198168 ENST00000354193 0.198±0.00 1.886±0.00 1.042±0.00 3.497±1.02 0.476±0.01 1.776±0.00 0.649±0.07 1.389±0.19 0.477±0.05 1.281±0.57 0.566±0.25 1.246±0.36 0.288±0.15 2.050±0.49
ENST00000525670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.911±0.00 N/A N/A N/A
ENST00000529848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.021±0.00
ENST00000530199 1.551±0.00 N/A N/A N/A 1.658±0.00 3.296±0.00 4.818±0.00 N/A 3.604±0.00 11.524±0.00 1.920±0.00 N/A 0.864±0.25 12.418±7.52
ENST00000533774 1.974±0.00 6.340±0.00 N/A N/A 0.917±0.00 N/A N/A N/A N/A N/A 1.466±0.00 N/A 0.650±0.00 N/A
ENSG00000255359 ENST00000529466 0.078±0.00 0.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.616±0.00 N/A 6.265±0.00
ENST00000532798 N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.441±1.84
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000074093 ENSMUST00000098414 3.480±0.47 3.415±0.56 3.883±0.57 5.417±1.01 1.886±1.28 2.498±0.25 4.512±1.42 4.384±0.36 4.806±1.87 2.326±0.90 10.408±0.46 1.926±1.19 0.448±0.44 15.154±7.35
ENSMUSG00000094445 ENSMUST00000180038 N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A 149.052±62.22
ENSMUST00000185758 N/A N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000185841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.397±0.00 N/A N/A
ENSMUST00000190307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.765±0.00 70.229±0.00

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