C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700057G04 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074139 1700057G04Rik 10090 + 9:92309377-92357876 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000098477 1700057G04Rik-001 92309377-92357876 protein_coding
  ENSMUST00000126606 1700057G04Rik-002 92309377-92327114 processed_transcript
  ENSMUST00000134712 1700057G04Rik-004 92309408-92351071 processed_transcript
  ENSMUST00000135182 1700057G04Rik-005 92351085-92357876 nonsense_mediated_decay
  ENSMUST00000150594 1700057G04Rik-003 92309377-92343683 protein_coding
  ENSMUST00000185580 1700057G04Rik-006 92343505-92357819 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLungOvaryPlacentaTestisENSMUST00000098477ENSMUST00000126606ENSMUST00000134712ENSMUST00000135182ENSMUST00000150594ENSMUST00000185580
Transcript ID Brain Colon Lung Ovary Placenta Testis
ENSMUST00000098477 N/A N/A N/A N/A N/A 32.117±11.38
ENSMUST00000126606 N/A N/A 0.081±0.00 N/A 0.019±0.00 9.230±0.00
ENSMUST00000134712 N/A 0.216±0.00 N/A N/A N/A 12.733±0.00
ENSMUST00000135182 0.044±0.00 N/A N/A N/A 0.103±0.00 11.336±0.00
ENSMUST00000150594 N/A N/A N/A N/A N/A 55.734±2.84
ENSMUST00000185580 N/A 0.295±0.00 N/A 0.042±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065H CIL_00065H_0007 CGP 9:92275602-92357876
CIL_00065H CIL_00065H_0008 CGP 9:92309377-92492456

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045470 FP245465.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000058638 si:ch211-71m22.1 si:ch211-71m22.1 protein_coding Danio_rerio
ENSDARG00000077468 si:ch73-206p6.1 si:ch73-206p6.1 protein_coding Danio_rerio
ENSDARG00000079075 si:ch211-71m22.3 si:ch211-71m22.3 protein_coding Danio_rerio
ENSDARG00000091266 si:ch211-71m22.5 si:ch211-71m22.5 protein_coding Danio_rerio
ENSG00000163746 PLSCR2 phospholipid scramblase 2 protein_coding Homo_sapiens
ENSG00000188313 PLSCR1 phospholipid scramblase 1 protein_coding Homo_sapiens

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