C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 826
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000074623 Gm826 10090 - 2:160311393-160334162 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099127 Gm826-003 160311861-160327494 protein_coding
  ENSMUST00000109475 Gm826-001 160311393-160313616 protein_coding
  ENSMUST00000138905 Gm826-002 160311744-160334162 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099127ENSMUST00000109475ENSMUST00000138905
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099127 N/A 0.131±0.00 N/A N/A 0.199±0.00 0.242±0.13 4.103±0.58 0.076±0.00 1.396±0.99 0.183±0.04 0.469±0.19 0.077±0.00 1.244±0.83 0.118±0.04
ENSMUST00000109475 0.071±0.02 0.335±0.00 N/A 0.045±0.01 0.128±0.03 0.274±0.10 2.568±0.81 0.077±0.01 1.048±0.82 0.098±0.05 0.437±0.18 0.145±0.06 0.663±0.80 0.169±0.12
ENSMUST00000138905 0.068±0.00 0.289±0.09 0.186±0.00 N/A 0.200±0.05 0.213±0.11 N/A 0.168±0.09 0.301±0.03 0.130±0.05 0.428±0.18 0.161±0.02 N/A 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U5 CIL_0007U5_0002 VISTA 2:159944493-160545157
CIL_0007LF CIL_0007LF_0002 UCNEbase 2:159986827-160493553
CIL_0007RT CIL_0007RT_0002 VISTA 2:159999417-160601134
CIL_0007XC CIL_0007XC_0002 VISTA 2:160082008-160682874
CIL_0008NB CIL_0008NB_0002 VISTA 2:160095708-160696677
CIL_0009AS CIL_0009AS_0002 VISTA 2:160115715-160717232
CIL_0009AT CIL_0009AT_0002 VISTA 2:160121995-160725459
CIL_0008TO CIL_0008TO_0002 VISTA 2:160151305-160752587
CIL_0009AU CIL_0009AU_0002 VISTA 2:160192291-160794448
CIL_0007XA CIL_0007XA_0002 VISTA 2:160203620-160804635
CIL_0008MI CIL_0008MI_0002 VISTA 2:160213670-160814864
CIL_0008QO CIL_0008QO_0002 VISTA 2:160215694-160817266
CIL_0009AV CIL_0009AV_0002 VISTA 2:160278530-160880585

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

No Homologs available.

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