C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008MI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs996 VISTA 9606 20:40554707-41155953
GeneTranscriptPositionBiotype
ENSG00000124181 (PLCG1)
phospholipase C, gamma 1 		ENST00000244007 (PLCG1-013) 41136960-41175721 protein_coding
ENST00000373271 (PLCG1-005) 41137237-41175721 protein_coding
ENST00000423733 (PLCG1-020) 41180456-41196787 processed_transcript
ENST00000461641 (PLCG1-012) 41172411-41174312 retained_intron
ENST00000465571 (PLCG1-003) 41165807-41166880 retained_intron
ENST00000470528 (PLCG1-008) 41163174-41164005 retained_intron
ENST00000473632 (PLCG1-002) 41165280-41165860 retained_intron
ENST00000477870 (PLCG1-004) 41167657-41170618 retained_intron
ENST00000483175 (PLCG1-011) 41167916-41170910 retained_intron
ENST00000483646 (PLCG1-007) 41137732-41162647 processed_transcript
ENST00000490253 (PLCG1-006) 41137550-41159823 retained_intron
ENST00000492148 (PLCG1-001) 41162962-41163982 retained_intron
ENST00000599785 (PLCG1-014) 41170189-41182989 nonsense_mediated_decay
ENST00000607954 (PLCG1-016) 41173804-41182989 nonsense_mediated_decay
ENST00000608689 (PLCG1-015) 41172439-41182989 processed_transcript
ENST00000608885 (PLCG1-019) 41172516-41182989 nonsense_mediated_decay
ENST00000609257 (PLCG1-018) 41173731-41182960 nonsense_mediated_decay
ENST00000609821 (PLCG1-017) 41173507-41182960 processed_transcript
ENST00000612731 (PLCG1-021) 41168841-41176281 processed_transcript
ENST00000617873 (PLCG1-022) 41166728-41169628 processed_transcript
ENST00000619272 (PLCG1-023) 41168799-41170251 processed_transcript
ENSG00000198900 (TOP1)
topoisomerase (DNA) I 		ENST00000361337 (TOP1-001) 41028818-41124487 protein_coding
ENSG00000204103 (MAFB)
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B 		ENST00000373313 (MAFB-001) 40685848-40689240 protein_coding
ENSG00000222612 (RNU2-52P)
RNA, U2 small nuclear 52, pseudogene 		ENST00000410680 (RNU2-52P-201) 41024205-41024394 snRNA
ENSG00000229771 (RP4-644L1.2)
 ENST00000428495 (RP4-644L1.2-001) 40696499-40698616 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008MI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs996 VISTA 10090 2:160213670-160814864
GeneTranscriptPositionBiotype
ENSMUSG00000016933 (Plcg1)
phospholipase C, gamma 1 		ENSMUST00000017077 (Plcg1-008) 160740987-160762506 processed_transcript
ENSMUST00000103115 (Plcg1-001) 160731310-160775760 protein_coding
ENSMUST00000109462 (Plcg1-003) 160731733-160763286 protein_coding
ENSMUST00000124652 (Plcg1-007) 160754572-160759447 processed_transcript
ENSMUST00000129568 (Plcg1-005) 160754547-160755169 retained_intron
ENSMUST00000143997 (Plcg1-002) 160760118-160762217 protein_coding
ENSMUST00000147254 (Plcg1-006) 160754906-160757147 retained_intron
ENSMUST00000151590 (Plcg1-004) 160731300-160762502 nonsense_mediated_decay
ENSMUST00000173061 (Plcg1-012) 160754067-160754864 retained_intron
ENSMUST00000173335 (Plcg1-010) 160752552-160758907 retained_intron
ENSMUST00000173791 (Plcg1-009) 160752487-160762155 retained_intron
ENSMUST00000174885 (Plcg1-011) 160731699-160747888 protein_coding
ENSMUSG00000035877 (Zhx3)
zinc fingers and homeoboxes 3 		ENSMUST00000103111 (Zhx3-003) 160765185-160872572 protein_coding
ENSMUST00000103112 (Zhx3-001) 160765782-160859631 protein_coding
ENSMUST00000109460 (Zhx3-201) 160770447-160872990 protein_coding
ENSMUST00000127201 (Zhx3-005) 160781941-160872990 protein_coding
ENSMUST00000133937 (Zhx3-004) 160748708-160872998 processed_transcript
ENSMUST00000176141 (Zhx3-008) 160781904-160872829 protein_coding
ENSMUSG00000070544 (Top1)
topoisomerase (DNA) I 		ENSMUST00000109468 (Top1-001) 160645888-160722764 protein_coding
ENSMUST00000129289 (Top1-003) 160670133-160684951 retained_intron
ENSMUST00000133262 (Top1-002) 160645980-160650107 processed_transcript
ENSMUST00000150039 (Top1-004) 160717469-160721384 retained_intron
ENSMUST00000164510 (Top1-006) 160702143-160703679 processed_transcript
ENSMUST00000164694 (Top1-005) 160685669-160693716 retained_intron
ENSMUSG00000074622 (Mafb)
v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) 		ENSMUST00000099126 (Mafb-001) 160363703-160367065 protein_coding
ENSMUSG00000074623 (Gm826)
predicted gene 826 		ENSMUST00000099127 (Gm826-003) 160311861-160327494 protein_coding
ENSMUST00000109475 (Gm826-001) 160311393-160313616 protein_coding
ENSMUST00000138905 (Gm826-002) 160311744-160334162 processed_transcript
ENSMUSG00000078955 (Gm14222)
predicted gene 14222 		ENSMUST00000128681 (Gm14222-001) 160583357-160585191 sense_intronic
ENSMUSG00000078956 (Gm14221)
predicted gene 14221 		ENSMUST00000109473 (Gm14221-001) 160568379-160619971 protein_coding
ENSMUSG00000094247 (Gm23968)
predicted gene, 23968 		ENSMUST00000175047 (Gm23968-201) 160624468-160624592 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MI_0001ENSG00000124181ENST00000244007ENST00000373271ENST00000423733ENST00000461641ENST00000465571ENST00000470528ENST00000473632ENST00000477870ENST00000483175ENST00000483646ENST00000490253ENST00000492148ENST00000599785ENST00000607954ENST00000608689ENST00000608885ENST00000609257ENST00000609821ENST00000612731ENST00000617873ENST00000619272ENSG00000198900ENST00000361337ENSG00000204103ENST00000373313ENSG00000222612ENST00000410680ENSG00000229771ENST00000428495CIL_0008MI_0002ENSMUSG00000016933ENSMUST00000017077ENSMUST00000103115ENSMUST00000109462ENSMUST00000124652ENSMUST00000129568ENSMUST00000143997ENSMUST00000147254ENSMUST00000151590ENSMUST00000173061ENSMUST00000173335ENSMUST00000173791ENSMUST00000174885ENSMUSG00000035877ENSMUST00000103111ENSMUST00000103112ENSMUST00000109460ENSMUST00000127201ENSMUST00000133937ENSMUST00000176141ENSMUSG00000070544ENSMUST00000109468ENSMUST00000129289ENSMUST00000133262ENSMUST00000150039ENSMUST00000164510ENSMUST00000164694ENSMUSG00000074622ENSMUST00000099126ENSMUSG00000074623ENSMUST00000099127ENSMUST00000109475ENSMUST00000138905ENSMUSG00000078955ENSMUST00000128681ENSMUSG00000078956ENSMUST00000109473ENSMUSG00000094247ENSMUST00000175047
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MI_0001ENSG00000124181ENST00000244007ENST00000373271ENSG00000198900ENST00000361337ENSG00000204103ENST00000373313ENSG00000222612ENST00000410680ENSG00000229771ENST00000428495CIL_0008MI_0002ENSMUSG00000016933ENSMUST00000017077ENSMUST00000103115ENSMUST00000109462ENSMUST00000143997ENSMUST00000151590ENSMUST00000174885ENSMUSG00000035877ENSMUST00000103111ENSMUST00000103112ENSMUST00000109460ENSMUSG00000070544ENSMUST00000109468ENSMUSG00000074622ENSMUST00000099126ENSMUSG00000074623ENSMUST00000099127ENSMUST00000109475ENSMUST00000138905ENSMUSG00000078955ENSMUST00000128681ENSMUSG00000078956ENSMUST00000109473ENSMUSG00000094247ENSMUST00000175047
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124181 ENST00000244007 12.376±0.00 20.541±0.00 N/A 9.490±4.33 8.233±1.86 8.260±4.83 5.412±3.16 9.886±0.00 2.644±0.00 11.772±4.11 4.888±3.48 18.427±9.11 17.431±3.43 27.520±5.19
ENST00000373271 N/A N/A N/A N/A N/A N/A N/A N/A 2.631±0.00 N/A N/A N/A N/A N/A
ENST00000423733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198900 ENST00000361337 15.936±0.00 16.667±0.00 2.262±0.00 5.701±3.75 11.109±2.11 12.413±11.05 10.103±0.00 27.022±0.00 7.670±4.34 37.451±0.00 5.127±3.65 27.442±26.10 29.408±16.77 28.371±8.37
ENSG00000204103 ENST00000373313 16.295±0.00 16.152±0.00 1.226±0.00 3.986±3.09 9.115±4.73 1.580±0.55 3.541±2.89 9.451±4.82 3.998±1.73 5.352±2.11 2.073±1.08 4.896±2.09 11.804±1.16 3.720±1.95
ENSG00000222612 ENST00000410680 0.066±0.00 N/A N/A N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A N/A 0.760±0.62 0.200±0.00
ENSG00000229771 ENST00000428495 N/A 0.008±0.00 N/A 0.016±0.00 0.046±0.00 0.028±0.00 N/A 0.046±0.00 0.034±0.00 0.083±0.00 N/A 0.048±0.03 N/A 0.066±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016933 ENSMUST00000017077 13.445±0.11 9.305±0.97 N/A 9.117±0.00 10.543±3.95 N/A 5.200±0.51 N/A 3.105±1.98 11.167±2.34 N/A N/A N/A N/A
ENSMUST00000103115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.805±0.13 N/A N/A
ENSMUST00000109462 13.774±1.08 7.612±1.97 15.803±0.72 27.011±10.92 8.209±2.52 3.782±0.41 8.831±0.76 8.653±1.53 5.716±1.97 18.914±3.47 5.955±0.61 26.469±12.14 20.431±6.97 4.608±0.30
ENSMUST00000124652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.731±0.42 N/A
ENSMUST00000147254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151590 10.434±0.00 11.200±4.19 N/A 15.053±0.00 6.419±0.00 4.349±1.34 N/A 5.092±1.61 3.769±0.09 11.105±1.50 N/A 17.001±4.11 N/A N/A
ENSMUST00000173061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174885 N/A 50.842±15.07 N/A N/A 35.281±3.63 N/A N/A N/A N/A 64.759±0.00 N/A 64.489±6.41 N/A N/A
ENSMUSG00000035877 ENSMUST00000103111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.712±0.01 N/A N/A N/A
ENSMUST00000103112 7.768±0.74 8.232±0.86 3.234±0.42 6.112±0.48 4.833±0.64 2.710±0.41 3.947±0.31 10.086±1.03 4.543±3.67 9.168±1.27 2.013±0.31 8.238±1.22 1.749±0.00 4.210±0.74
ENSMUST00000109460 N/A 7.044±0.99 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.455±3.18
ENSMUST00000127201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000070544 ENSMUST00000109468 3.993±1.02 75.295±19.04 10.858±0.46 18.563±3.69 2.247±0.35 3.004±0.91 2.823±0.41 4.137±0.58 13.911±11.99 5.207±0.31 6.734±0.99 26.336±26.39 40.654±22.01 5.018±1.12
ENSMUST00000129289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074622 ENSMUST00000099126 3.984±0.47 4.795±0.61 4.308±0.58 3.736±1.54 11.527±6.07 6.084±1.37 1.567±0.40 4.008±0.23 3.152±0.93 2.460±0.17 6.031±2.96 5.577±0.88 1.223±1.09 1.454±0.88
ENSMUSG00000074623 ENSMUST00000099127 N/A 0.131±0.00 N/A N/A 0.199±0.00 0.242±0.13 4.103±0.58 0.076±0.00 1.396±0.99 0.183±0.04 0.469±0.19 0.077±0.00 1.244±0.83 0.118±0.04
ENSMUST00000109475 0.071±0.02 0.335±0.00 N/A 0.045±0.01 0.128±0.03 0.274±0.10 2.568±0.81 0.077±0.01 1.048±0.82 0.098±0.05 0.437±0.18 0.145±0.06 0.663±0.80 0.169±0.12
ENSMUST00000138905 0.068±0.00 0.289±0.09 0.186±0.00 N/A 0.200±0.05 0.213±0.11 N/A 0.168±0.09 0.301±0.03 0.130±0.05 0.428±0.18 0.161±0.02 N/A 0.066±0.00
ENSMUSG00000078955 ENSMUST00000128681 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.02 0.197±0.00 N/A 0.092±0.00 0.196±0.08 0.531±0.21
ENSMUSG00000078956 ENSMUST00000109473 N/A N/A N/A 0.084±0.00 0.564±0.00 N/A N/A 0.163±0.00 N/A 1.011±0.00 N/A 0.882±0.50 0.455±0.00 0.245±0.09
ENSMUSG00000094247 ENSMUST00000175047 N/A N/A N/A 14.613±8.23 2730.483±1895.92 N/A 1081.760±25.30 929.627±87.33 10.336±3.57 728.361±165.45 N/A 18.563±0.13 5.941±2.33 1024.280±0.00

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