C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fidgetin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000075324 Fign 10090 - 2:63971507-64098038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102728 Fign-002 63977337-64098038 nonsense_mediated_decay
  ENSMUST00000126042 Fign-004 63980447-64097988 processed_transcript
  ENSMUST00000131615 Fign-001 63971507-64098012 protein_coding
  ENSMUST00000153538 Fign-003 63980616-64098010 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102728ENSMUST00000126042ENSMUST00000131615ENSMUST00000153538
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102728 0.478±0.11 0.884±0.12 0.531±0.00 N/A 0.429±0.12 0.208±0.13 0.668±0.05 0.626±0.26 0.503±0.18 0.804±0.25 0.080±0.02 0.669±0.31 0.059±0.04 0.037±0.02
ENSMUST00000126042 N/A N/A N/A N/A N/A 0.587±0.00 N/A N/A N/A N/A 0.520±0.00 N/A N/A N/A
ENSMUST00000131615 N/A 0.664±0.14 0.351±0.17 1.917±0.67 0.321±0.03 0.131±0.03 0.814±0.36 0.443±0.12 0.380±0.24 0.488±0.31 0.086±0.04 0.488±0.34 0.135±0.11 0.025±0.00
ENSMUST00000153538 N/A N/A N/A N/A N/A 0.656±0.00 N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KS CIL_0005KS_0002 CGP 2:62693414-64098038
CIL_0007KU CIL_0007KU_0002 UCNEbase 2:63574157-64878215
CIL_00089I CIL_00089I_0002 VISTA 2:63577720-64179192
CIL_0008D4 CIL_0008D4_0002 VISTA 2:63662796-64264416
CIL_0008AC CIL_0008AC_0002 VISTA 2:63779255-64380739
CIL_00098N CIL_00098N_0002 VISTA 2:63872017-64472993
CIL_0008B1 CIL_0008B1_0002 VISTA 2:63877546-64478374
CIL_0006CN CIL_0006CN_0002 CGP 2:63971507-65024987

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0007067 IEA mitotic nuclear division
GO:0008022 IPI protein C-terminus binding
GO:0016363 IDA nuclear matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091716 BX005368.2 Uncharacterized protein protein_coding Danio_rerio
ENSG00000182263 FIGN fidgetin protein_coding Homo_sapiens

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