C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fidgetin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102728 Fign-002 ENSMUSG00000075324 10090 - 2:63977337-64098038 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102728
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102728 0.478±0.11 0.884±0.12 0.531±0.00 0.429±0.12 0.208±0.13 0.668±0.05 0.626±0.26 0.503±0.18 0.804±0.25 0.080±0.02 0.669±0.31 0.059±0.04 0.037±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KS CIL_0005KS_0002 CGP 2:62693414-64098038
CIL_0007KU CIL_0007KU_0002 UCNEbase 2:63574157-64878215
CIL_00089I CIL_00089I_0002 VISTA 2:63577720-64179192
CIL_0008D4 CIL_0008D4_0002 VISTA 2:63662796-64264416
CIL_0008AC CIL_0008AC_0002 VISTA 2:63779255-64380739
CIL_00098N CIL_00098N_0002 VISTA 2:63872017-64472993
CIL_0008B1 CIL_0008B1_0002 VISTA 2:63877546-64478374
CIL_0006CN CIL_0006CN_0002 CGP 2:63971507-65024987

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000023105 fign-201 protein_coding Danio_rerio 0.0000000000003 82
ENST00000333129 FIGN-001 protein_coding Homo_sapiens 0 4578
ENST00000409634 FIGN-004 protein_coding Homo_sapiens 0 604
ENST00000482917 FIGN-003 processed_transcript Homo_sapiens 0 652

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