C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 11744
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000075410 Gm11744 10090 + 11:116653534-116668389 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106381 Gm11744-001 116653855-116668389 protein_coding
  ENSMUST00000116318 Gm11744-201 116657108-116668387 protein_coding
  ENSMUST00000148484 Gm11744-002 116653534-116668092 nonsense_mediated_decay
  ENSMUST00000156088 Gm11744-003 116657156-116660116 retained_intron
  ENSMUST00000178875 Gm11744-202 116653534-116668387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000106381ENSMUST00000116318ENSMUST00000148484ENSMUST00000156088ENSMUST00000178875
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000106381 N/A N/A N/A 0.178±0.00 1.001±0.00
ENSMUST00000116318 N/A N/A N/A 0.300±0.00 4.529±1.54
ENSMUST00000148484 7.024±1.30 N/A N/A N/A N/A
ENSMUST00000156088 N/A N/A N/A N/A 0.610±0.00
ENSMUST00000178875 N/A 8.338±0.00 20.247±0.00 0.282±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CA CIL_0000CA_0002 CGP 11:116598165-116654313
CIL_0000CF CIL_0000CF_0002 CGP 11:116645595-116668389

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0007601 IEA visual perception
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0050896 IEA response to stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000214140 PRCD progressive rod-cone degeneration protein_coding Homo_sapiens

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