C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000CA_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000129667-ENSG00000161544 | CGP | 9606 | 17:76470891-76551175  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000129667  (RHBDF2)rhomboid 5 homolog 2 (Drosophila) |
ENST00000313080 (RHBDF2-001)
|
76470896-76501407 | protein_coding | |
|
ENST00000585701 (RHBDF2-016)
|
76481383-76493154 | protein_coding | ||
|
ENST00000585989 (RHBDF2-010)
|
76479212-76501421 | protein_coding | ||
|
ENST00000587640 (RHBDF2-005)
|
76475923-76481527 | retained_intron | ||
|
ENST00000589526 (RHBDF2-013)
|
76479736-76493202 | protein_coding | ||
|
ENST00000589582 (RHBDF2-004)
|
76474204-76481547 | retained_intron | ||
|
ENST00000590168 (RHBDF2-006)
|
76470891-76477731 | retained_intron | ||
|
ENST00000590288 (RHBDF2-008)
|
76481446-76501371 | protein_coding | ||
|
ENST00000590322 (RHBDF2-015)
|
76481439-76488178 | protein_coding | ||
|
ENST00000591192 (RHBDF2-014)
|
76481384-76493154 | protein_coding | ||
|
ENST00000591255 (RHBDF2-011)
|
76481485-76501415 | protein_coding | ||
|
ENST00000591697 (RHBDF2-009)
|
76479783-76501423 | protein_coding | ||
|
ENST00000591860 (RHBDF2-020)
|
76471814-76473075 | protein_coding | ||
|
ENST00000591879 (RHBDF2-017)
|
76479786-76481894 | protein_coding | ||
|
ENST00000591885 (RHBDF2-002)
|
76471069-76501790 | protein_coding | ||
|
ENST00000592123 (RHBDF2-012)
|
76479082-76501412 | protein_coding | ||
|
ENST00000592378 (RHBDF2-019)
|
76479146-76501384 | processed_transcript | ||
|
ENST00000593103 (RHBDF2-018)
|
76487411-76501415 | retained_intron | ||
|
ENSG00000161544 (CYGB) cytoglobin |
ENST00000293230 (CYGB-001)
|
76527356-76537905 | protein_coding | |
|
ENST00000586160 (CYGB-004)
|
76528057-76528993 | processed_transcript | ||
|
ENST00000589145 (CYGB-005)
|
76528534-76551175 | protein_coding | ||
|
ENST00000589342 (CYGB-002)
|
76528282-76537652 | protein_coding | ||
|
ENST00000590175 (CYGB-003)
|
76528368-76532065 | protein_coding | ||
|
ENSG00000214140 (PRCD) progressive rod-cone degeneration |
ENST00000397630 (PRCD-004)
|
76540471-76545345 | retained_intron | |
|
ENST00000397633 (PRCD-001)
|
76527789-76545376 | processed_transcript | ||
|
ENST00000465808 (PRCD-002)
|
76538416-76544370 | processed_transcript | ||
|
ENST00000586148 (PRCD-008)
|
76540090-76543387 | protein_coding | ||
|
ENST00000587063 (PRCD-013)
|
76547290-76553578 | processed_transcript | ||
|
ENST00000587289 (PRCD-011)
|
76540549-76553337 | processed_transcript | ||
|
ENST00000587813 (PRCD-009)
|
76540536-76553574 | processed_transcript | ||
|
ENST00000590555 (PRCD-007)
|
76538064-76543107 | processed_transcript | ||
|
ENST00000591317 (PRCD-006)
|
76543843-76553578 | processed_transcript | ||
|
ENST00000592014 (PRCD-003)
|
76540033-76543838 | protein_coding | ||
|
ENST00000592340 (PRCD-010)
|
76540549-76553194 | processed_transcript | ||
|
ENST00000592432 (PRCD-005)
|
76527586-76553578 | processed_transcript | ||
|
ENST00000593023 (PRCD-012)
|
76546064-76553578 | processed_transcript | ||
|
ENSG00000267543 (RP11-666A8.7) |
ENST00000590241 (RP11-666A8.7-001)
|
76549951-76550826 | sense_intronic | |
|
ENSG00000267546 (RP11-666A8.8) |
ENST00000589963 (RP11-666A8.8-001)
|
76545668-76557652 | antisense | |
|
ENST00000591967 (RP11-666A8.8-002)
|
76550841-76557648 | antisense | ||
|
ENST00000592622 (RP11-666A8.8-003)
|
76551580-76557683 | antisense | ||
|
ENST00000607136 (RP11-666A8.8-004)
|
76551780-76552931 | antisense | ||
| CIL_0000CA_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000020806-ENSMUSG00000020810 | CGP | 10090 | 11:116598165-116654313 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000020806 (Rhbdf2) rhomboid 5 homolog 2 (Drosophila) |
ENSMUST00000103028 (Rhbdf2-001)
|
116598169-116627019 | protein_coding | |
|
ENSMUST00000103029 (Rhbdf2-003)
|
116598165-116624200 | protein_coding | ||
|
ENSMUST00000126819 (Rhbdf2-002)
|
116603253-116624247 | retained_intron | ||
|
ENSMUST00000138125 (Rhbdf2-004)
|
116601086-116602595 | processed_transcript | ||
|
ENSMUSG00000020810 (Cygb) cytoglobin |
ENSMUST00000021166 (Cygb-001)
|
116645595-116654313 | protein_coding | |
|
ENSMUSG00000075410 (Gm11744) predicted gene 11744 |
ENSMUST00000106381 (Gm11744-001)
|
116653855-116668389 | protein_coding | |
|
ENSMUST00000116318 (Gm11744-201)
|
116657108-116668387 | protein_coding | ||
|
ENSMUST00000148484 (Gm11744-002)
|
116653534-116668092 | nonsense_mediated_decay | ||
|
ENSMUST00000156088 (Gm11744-003)
|
116657156-116660116 | retained_intron | ||
|
ENSMUST00000178875 (Gm11744-202)
|
116653534-116668387 | protein_coding | ||
Expression Patterns
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