C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: formin binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000075415 Fnbp1 10090 - 2:31026206-31142008 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073879 Fnbp1-003 31026206-31141802 protein_coding
  ENSMUST00000075326 Fnbp1-007 31033010-31141802 protein_coding
  ENSMUST00000100207 Fnbp1-004 31033010-31141802 protein_coding
  ENSMUST00000100208 Fnbp1-006 31032999-31141802 protein_coding
  ENSMUST00000113552 Fnbp1-002 31053235-31141939 protein_coding
  ENSMUST00000113555 Fnbp1-005 31033010-31141802 protein_coding
  ENSMUST00000113559 Fnbp1-201 31026207-31096500 protein_coding
  ENSMUST00000113560 Fnbp1-001 31026207-31142008 protein_coding
  ENSMUST00000113562 Fnbp1-202 31026207-31142008 protein_coding
  ENSMUST00000113564 Fnbp1-203 31026207-31142008 protein_coding
  ENSMUST00000128431 Fnbp1-013 31033091-31055444 processed_transcript
  ENSMUST00000128500 Fnbp1-008 31033009-31105352 protein_coding
  ENSMUST00000136085 Fnbp1-011 31096091-31105450 processed_transcript
  ENSMUST00000136181 Fnbp1-009 31055567-31141955 protein_coding
  ENSMUST00000138581 Fnbp1-012 31054200-31096498 processed_transcript
  ENSMUST00000149196 Fnbp1-010 31058944-31116312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073879ENSMUST00000075326ENSMUST00000100208ENSMUST00000113552ENSMUST00000113559ENSMUST00000113560ENSMUST00000113562ENSMUST00000113564ENSMUST00000128500ENSMUST00000138581ENSMUST00000149196
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073879 4.716±1.15 N/A 17.789±0.00 3.364±1.26 5.435±2.46 2.277±0.00 N/A 1.639±0.17 1.397±0.65 N/A 0.299±0.00 4.842±2.16 2.939±0.96 1.090±0.69
ENSMUST00000075326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.584±0.00
ENSMUST00000100208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.350±0.00 9.347±3.89 N/A
ENSMUST00000113552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.139±0.21 N/A N/A N/A
ENSMUST00000113559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.709±0.01 4.398±0.97 N/A N/A
ENSMUST00000113560 6.736±0.00 N/A 11.811±0.00 8.871±3.06 N/A N/A 5.150±0.68 N/A 0.600±0.00 N/A 0.937±0.26 N/A 2.752±0.62 0.643±0.00
ENSMUST00000113562 8.449±0.00 N/A 26.981±0.00 1.993±0.00 12.166±3.81 13.579±1.78 4.921±2.80 3.327±0.88 2.442±0.95 9.525±5.16 0.525±0.00 12.214±5.31 N/A 1.123±0.00
ENSMUST00000113564 N/A 5.236±1.44 19.643±0.00 4.491±2.92 7.253±1.00 5.615±0.28 3.893±0.00 2.217±0.71 0.793±0.14 5.308±1.54 0.652±0.00 4.122±0.25 2.235±0.00 0.755±0.00
ENSMUST00000128500 N/A N/A N/A 69.672±0.00 N/A N/A N/A N/A N/A N/A N/A 35.732±0.00 20.116±6.13 8.579±0.00
ENSMUST00000138581 N/A N/A N/A 64.953±0.00 N/A N/A N/A N/A N/A N/A N/A 38.828±0.00 35.014±7.33 7.158±0.00
ENSMUST00000149196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.824±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FN CIL_0006FN_0002 CGP 2:30982279-31142008
CIL_0005U8 CIL_0005U8_0002 CGP 2:31026206-31219548

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005764 IEA lysosome
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005905 IEA coated pit
GO:0006897 IEA endocytosis
GO:0008289 IEA lipid binding
GO:0031410 IEA cytoplasmic vesicle
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036156 fnbp1 formin binding protein 1 protein_coding Danio_rerio
ENSDARG00000038219 FNBP1 (2 of 3) formin binding protein 1 protein_coding Danio_rerio
ENSDARG00000096367 FNBP1 (3 of 3) formin binding protein 1 protein_coding Danio_rerio
ENSG00000187239 FNBP1 formin binding protein 1 protein_coding Homo_sapiens

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