C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006FN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136878-ENSG00000187239 CGP 9606 9:129834698-130043194
GeneTranscriptPositionBiotype
ENSG00000136819 (C9orf78)
chromosome 9 open reading frame 78 		ENST00000372447 (C9orf78-007) 129827290-129835275 protein_coding
ENST00000461349 (C9orf78-006) 129827968-129835254 processed_transcript
ENST00000461539 (C9orf78-004) 129829279-129835863 processed_transcript
ENST00000461762 (C9orf78-002) 129828428-129834547 processed_transcript
ENST00000480023 (C9orf78-001) 129828442-129830685 processed_transcript
ENST00000492991 (C9orf78-005) 129830935-129835281 processed_transcript
ENST00000495934 (C9orf78-003) 129831410-129833517 processed_transcript
ENST00000615599 (C9orf78-201) 129827297-129835281 protein_coding
ENSG00000136878 (USP20)
ubiquitin specific peptidase 20 		ENST00000315480 (USP20-003) 129835470-129881828 protein_coding
ENST00000358355 (USP20-002) 129835478-129881828 protein_coding
ENST00000372429 (USP20-001) 129835446-129881838 protein_coding
ENST00000472108 (USP20-007) 129879373-129881828 processed_transcript
ENST00000474895 (USP20-006) 129868322-129878437 processed_transcript
ENST00000491053 (USP20-004) 129834698-129852636 processed_transcript
ENST00000491731 (USP20-008) 129868367-129870152 processed_transcript
ENST00000494971 (USP20-005) 129835417-129858547 processed_transcript
ENST00000496927 (USP20-009) 129875597-129880518 processed_transcript
ENSG00000187239 (FNBP1)
formin binding protein 1 		ENST00000355681 (FNBP1-003) 129895812-130043167 protein_coding
ENST00000420781 (FNBP1-201) 129887187-130043194 protein_coding
ENST00000443566 (FNBP1-202) 129887187-130043194 protein_coding
ENST00000446176 (FNBP1-002) 129887187-130043162 protein_coding
ENST00000449089 (FNBP1-004) 129895268-129994867 protein_coding
ENST00000462766 (FNBP1-006) 129899993-129916243 processed_transcript
ENST00000478129 (FNBP1-008) 129899968-129927227 processed_transcript
ENST00000482107 (FNBP1-007) 129919019-129925069 processed_transcript
ENST00000491905 (FNBP1-001) 129978347-129994935 processed_transcript
ENSG00000224988 (RP11-409K20.7)
 ENST00000417984 (RP11-409K20.7-001) 129883693-129884170 processed_pseudogene
ENSG00000230684 (RP11-409K20.6)
 ENST00000414926 (RP11-409K20.6-001) 129933536-129936541 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0006FN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026854-ENSMUSG00000075415 CGP 10090 2:30982279-31142008
GeneTranscriptPositionBiotype
ENSMUSG00000075415 (Fnbp1)
formin binding protein 1 		ENSMUST00000073879 (Fnbp1-003) 31026206-31141802 protein_coding
ENSMUST00000075326 (Fnbp1-007) 31033010-31141802 protein_coding
ENSMUST00000100207 (Fnbp1-004) 31033010-31141802 protein_coding
ENSMUST00000100208 (Fnbp1-006) 31032999-31141802 protein_coding
ENSMUST00000113552 (Fnbp1-002) 31053235-31141939 protein_coding
ENSMUST00000113555 (Fnbp1-005) 31033010-31141802 protein_coding
ENSMUST00000113559 (Fnbp1-201) 31026207-31096500 protein_coding
ENSMUST00000113560 (Fnbp1-001) 31026207-31142008 protein_coding
ENSMUST00000113562 (Fnbp1-202) 31026207-31142008 protein_coding
ENSMUST00000113564 (Fnbp1-203) 31026207-31142008 protein_coding
ENSMUST00000128431 (Fnbp1-013) 31033091-31055444 processed_transcript
ENSMUST00000128500 (Fnbp1-008) 31033009-31105352 protein_coding
ENSMUST00000136085 (Fnbp1-011) 31096091-31105450 processed_transcript
ENSMUST00000136181 (Fnbp1-009) 31055567-31141955 protein_coding
ENSMUST00000138581 (Fnbp1-012) 31054200-31096498 processed_transcript
ENSMUST00000149196 (Fnbp1-010) 31058944-31116312 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FN_0001ENSG00000136819ENST00000372447ENST00000461349ENST00000461539ENST00000461762ENST00000480023ENST00000492991ENST00000495934ENST00000615599ENSG00000136878ENST00000315480ENST00000358355ENST00000372429ENST00000472108ENST00000474895ENST00000491053ENST00000491731ENST00000494971ENST00000496927ENSG00000187239ENST00000355681ENST00000420781ENST00000443566ENST00000446176ENST00000449089ENST00000462766ENST00000478129ENST00000482107ENST00000491905ENSG00000224988ENST00000417984ENSG00000230684ENST00000414926CIL_0006FN_0002ENSMUSG00000075415ENSMUST00000073879ENSMUST00000075326ENSMUST00000100207ENSMUST00000100208ENSMUST00000113552ENSMUST00000113555ENSMUST00000113559ENSMUST00000113560ENSMUST00000113562ENSMUST00000113564ENSMUST00000128431ENSMUST00000128500ENSMUST00000136085ENSMUST00000136181ENSMUST00000138581ENSMUST00000149196
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006FN_0001ENSG00000136819ENST00000372447ENST00000461539ENST00000492991ENST00000615599ENSG00000136878ENST00000315480ENST00000358355ENST00000372429ENST00000472108ENSG00000187239ENST00000355681ENST00000420781ENST00000443566ENST00000446176ENST00000449089ENST00000491905ENSG00000224988ENST00000417984ENSG00000230684ENST00000414926CIL_0006FN_0002ENSMUSG00000075415ENSMUST00000073879ENSMUST00000075326ENSMUST00000100208ENSMUST00000113552ENSMUST00000113559ENSMUST00000113560ENSMUST00000113562ENSMUST00000113564ENSMUST00000128500ENSMUST00000138581ENSMUST00000149196
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136819 ENST00000372447 N/A N/A N/A 3.426±0.00 N/A 0.455±0.00 1.162±0.00 1.419±0.00 2.596±0.00 N/A N/A 2.988±0.00 9.838±0.00 N/A
ENST00000461349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461539 19.570±0.00 42.375±0.00 2.663±0.00 29.228±22.79 15.757±10.59 32.515±0.00 8.126±6.63 19.827±17.14 5.073±0.00 N/A 1.723±0.00 19.426±8.96 25.025±0.00 46.971±3.63
ENST00000461762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492991 N/A N/A 2.767±0.00 N/A N/A 1.713±0.00 N/A N/A N/A N/A 2.452±0.00 17.345±0.00 18.484±0.00 25.310±0.00
ENST00000495934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615599 15.708±0.00 35.099±0.00 1.356±0.00 21.458±0.00 10.439±7.37 25.312±0.00 12.071±0.00 14.006±12.61 19.897±0.00 13.001±9.91 18.406±0.00 18.246±5.82 16.164±4.98 26.814±0.12
ENSG00000136878 ENST00000315480 N/A N/A N/A 7.438±0.00 N/A N/A N/A N/A N/A N/A N/A 4.861±0.08 N/A N/A
ENST00000358355 N/A N/A 0.467±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372429 4.487±0.00 N/A N/A 1.441±0.00 N/A 0.815±0.00 N/A 0.528±0.00 1.482±0.00 8.134±0.00 5.587±0.00 6.191±0.00 4.804±1.29 7.943±0.00
ENST00000472108 N/A 20.567±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187239 ENST00000355681 N/A N/A 2.194±0.00 2.306±0.00 N/A 5.350±0.00 N/A N/A 5.288±0.00 N/A N/A N/A N/A N/A
ENST00000420781 5.475±0.00 N/A 0.488±0.00 3.343±0.00 2.253±0.00 N/A 2.213±0.00 1.078±0.28 1.298±0.00 5.366±0.00 N/A 4.528±2.92 3.858±1.11 6.007±1.09
ENST00000443566 5.824±0.00 20.707±0.00 N/A 4.156±0.00 2.088±0.25 1.392±0.00 0.606±0.36 2.439±0.00 0.478±0.00 4.805±0.00 N/A 3.680±0.00 N/A 3.467±1.30
ENST00000446176 N/A N/A N/A 12.240±0.00 2.312±0.06 15.293±0.00 N/A N/A 6.226±0.00 N/A N/A 3.101±2.41 3.267±0.00 2.460±0.00
ENST00000449089 4.066±0.00 13.959±0.00 N/A 6.652±0.00 2.466±0.17 N/A 0.865±0.38 1.746±0.72 0.892±0.00 2.905±0.00 N/A 2.105±0.92 2.758±1.35 3.277±0.28
ENST00000462766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.649±0.00 8.810±0.00 9.344±0.00
ENSG00000224988 ENST00000417984 N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.327±0.00
ENSG00000230684 ENST00000414926 0.309±0.00 0.667±0.00 N/A 0.325±0.04 N/A 0.296±0.00 0.150±0.00 N/A 1.965±0.00 N/A N/A 0.348±0.00 N/A 0.181±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000075415 ENSMUST00000073879 4.716±1.15 N/A 17.789±0.00 3.364±1.26 5.435±2.46 2.277±0.00 N/A 1.639±0.17 1.397±0.65 N/A 0.299±0.00 4.842±2.16 2.939±0.96 1.090±0.69
ENSMUST00000075326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.584±0.00
ENSMUST00000100207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000100208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.350±0.00 9.347±3.89 N/A
ENSMUST00000113552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.139±0.21 N/A N/A N/A
ENSMUST00000113555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.709±0.01 4.398±0.97 N/A N/A
ENSMUST00000113560 6.736±0.00 N/A 11.811±0.00 8.871±3.06 N/A N/A 5.150±0.68 N/A 0.600±0.00 N/A 0.937±0.26 N/A 2.752±0.62 0.643±0.00
ENSMUST00000113562 8.449±0.00 N/A 26.981±0.00 1.993±0.00 12.166±3.81 13.579±1.78 4.921±2.80 3.327±0.88 2.442±0.95 9.525±5.16 0.525±0.00 12.214±5.31 N/A 1.123±0.00
ENSMUST00000113564 N/A 5.236±1.44 19.643±0.00 4.491±2.92 7.253±1.00 5.615±0.28 3.893±0.00 2.217±0.71 0.793±0.14 5.308±1.54 0.652±0.00 4.122±0.25 2.235±0.00 0.755±0.00
ENSMUST00000128431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128500 N/A N/A N/A 69.672±0.00 N/A N/A N/A N/A N/A N/A N/A 35.732±0.00 20.116±6.13 8.579±0.00
ENSMUST00000136085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138581 N/A N/A N/A 64.953±0.00 N/A N/A N/A N/A N/A N/A N/A 38.828±0.00 35.014±7.33 7.158±0.00
ENSMUST00000149196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.824±0.00 N/A

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