C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: formin binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187239 FNBP1 9606 - 9:129887187-130043194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355681 FNBP1-003 129895812-130043167 protein_coding
  ENST00000420781 FNBP1-201 129887187-130043194 protein_coding
  ENST00000443566 FNBP1-202 129887187-130043194 protein_coding
  ENST00000446176 FNBP1-002 129887187-130043162 protein_coding
  ENST00000449089 FNBP1-004 129895268-129994867 protein_coding
  ENST00000462766 FNBP1-006 129899993-129916243 processed_transcript
  ENST00000478129 FNBP1-008 129899968-129927227 processed_transcript
  ENST00000482107 FNBP1-007 129919019-129925069 processed_transcript
  ENST00000491905 FNBP1-001 129978347-129994935 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000355681ENST00000420781ENST00000443566ENST00000446176ENST00000449089ENST00000491905
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000355681 N/A N/A 2.194±0.00 2.306±0.00 N/A 5.350±0.00 N/A N/A 5.288±0.00 N/A N/A N/A N/A
ENST00000420781 5.475±0.00 N/A 0.488±0.00 3.343±0.00 2.253±0.00 N/A 2.213±0.00 1.078±0.28 1.298±0.00 5.366±0.00 4.528±2.92 3.858±1.11 6.007±1.09
ENST00000443566 5.824±0.00 20.707±0.00 N/A 4.156±0.00 2.088±0.25 1.392±0.00 0.606±0.36 2.439±0.00 0.478±0.00 4.805±0.00 3.680±0.00 N/A 3.467±1.30
ENST00000446176 N/A N/A N/A 12.240±0.00 2.312±0.06 15.293±0.00 N/A N/A 6.226±0.00 N/A 3.101±2.41 3.267±0.00 2.460±0.00
ENST00000449089 4.066±0.00 13.959±0.00 N/A 6.652±0.00 2.466±0.17 N/A 0.865±0.38 1.746±0.72 0.892±0.00 2.905±0.00 2.105±0.92 2.758±1.35 3.277±0.28
ENST00000491905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.649±0.00 8.810±0.00 9.344±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FN CIL_0006FN_0001 CGP 9:129834698-130043194
CIL_0005U8 CIL_0005U8_0001 CGP 9:129887187-130140169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005764 IEA lysosome
GO:0005840 IEA ribosome
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005905 IEA coated pit
GO:0006412 IEA translation
GO:0006897 IEA endocytosis
GO:0007165 IEA signal transduction
GO:0008289 IEA lipid binding
GO:0031410 IEA cytoplasmic vesicle
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036156 fnbp1 formin binding protein 1 protein_coding Danio_rerio
ENSDARG00000038219 FNBP1 (2 of 3) formin binding protein 1 protein_coding Danio_rerio
ENSDARG00000096367 FNBP1 (3 of 3) formin binding protein 1 protein_coding Danio_rerio
ENSMUSG00000075415 Fnbp1 formin binding protein 1 protein_coding Mus_musculus

Loading