C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alanyl-tRNA synthetase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000075528 Aarsd1 10090 - 11:101406839-101417615 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070395 Aarsd1-003 101406839-101417615 protein_coding
  ENSMUST00000125472 Aarsd1-010 101416748-101417406 retained_intron
  ENSMUST00000133240 Aarsd1-009 101410808-101417384 processed_transcript
  ENSMUST00000140123 Aarsd1-011 101411409-101417382 retained_intron
  ENSMUST00000189049 Aarsd1-012 101413763-101414579 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070395
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070395 12.948±1.92 10.960±1.15 16.218±0.86 33.491±19.16 9.988±1.15 7.941±1.01 11.443±0.89 13.976±1.09 14.960±8.83 10.060±0.94 18.261±1.28 18.385±11.10 22.318±19.94 15.020±9.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000447 CIL_000447_0002 CGP 11:101367561-101424796
CIL_00063V CIL_00063V_0002 CGP 11:101406664-101424796

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002161 IDA aminoacyl-tRNA editing activity
GO:0002196 IDA Ser-tRNA(Ala) hydrolase activity
GO:0003676 IEA nucleic acid binding
GO:0004813 IEA alanine-tRNA ligase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006419 IEA alanyl-tRNA aminoacylation
GO:0006450 IDA regulation of translational fidelity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015747 aarsd1 alanyl-tRNA synthetase domain containing 1 protein_coding Danio_rerio
ENSG00000266967 AARSD1 alanyl-tRNA synthetase domain containing 1 protein_coding Homo_sapiens

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