C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA E430018J23 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078580 E430018J23Rik 10090 - 7:127389673-127393629 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074249 E430018J23Rik-002 127390907-127393629 protein_coding
  ENSMUST00000106303 E430018J23Rik-003 127392419-127393620 protein_coding
  ENSMUST00000165495 E430018J23Rik-001 127389673-127393619 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074249ENSMUST00000106303ENSMUST00000165495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074249 1.189±0.37 5.011±0.67 2.555±0.32 2.049±1.37 2.793±1.17 4.888±0.65 1.227±0.46 2.572±0.61 1.774±1.23 3.087±1.34 0.803±0.27 3.291±1.30 0.762±0.58 2.149±0.19
ENSMUST00000106303 N/A N/A N/A 2.426±0.00 N/A N/A N/A N/A N/A N/A N/A 2.166±0.00 1.043±0.37 2.249±0.28
ENSMUST00000165495 0.307±0.07 0.645±0.00 0.564±0.18 0.517±0.00 0.429±0.16 0.555±0.09 N/A 0.365±0.10 0.231±0.09 0.414±0.04 0.113±0.05 0.632±0.22 0.143±0.01 0.249±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U5 CIL_0000U5_0002 CGP 7:127382260-127393629
CIL_0000U5 CIL_0000U5_0004 CGP 7:127389673-127406822

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000169955 ZNF747 zinc finger protein 747 protein_coding Homo_sapiens
ENSG00000260869 AC002310.13 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000455659} protein_coding Homo_sapiens

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