C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA E430018J23 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106303 E430018J23Rik-003 ENSMUSG00000078580 10090 - 7:127392419-127393620 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000106303
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000106303 2.426±0.00 2.166±0.00 1.043±0.37 2.249±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U5 CIL_0000U5_0002 CGP 7:127382260-127393629
CIL_0000U5 CIL_0000U5_0004 CGP 7:127389673-127406822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223459 ZNF688-001 protein_coding Homo_sapiens 1e-35 156
ENST00000252797 ZNF764-001 protein_coding Homo_sapiens 0 209
ENST00000287461 ZNF689-001 protein_coding Homo_sapiens 4e-32 145
ENST00000395091 ZNF764-002 protein_coding Homo_sapiens 0 219
ENST00000395216 ZNF785-001 protein_coding Homo_sapiens 2e-24 119
ENST00000470110 ZNF785-003 protein_coding Homo_sapiens 2e-24 119
ENST00000563665 ZNF688-004 retained_intron Homo_sapiens 6e-35 152
ENST00000563707 ZNF688-005 protein_coding Homo_sapiens 1e-35 152
ENST00000567855 ZNF688-003 protein_coding Homo_sapiens 3e-36 156
ENST00000568114 AC002310.13-001 protein_coding Homo_sapiens 0 196
ENST00000568333 ZNF764-004 retained_intron Homo_sapiens 6e-30 135
ENST00000611647 ZNF689-201 protein_coding Homo_sapiens 3e-32 145

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