C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA E430018J23 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165495 E430018J23Rik-001 ENSMUSG00000078580 10090 - 7:127389673-127393619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165495
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165495 0.307±0.07 0.645±0.00 0.564±0.18 0.517±0.00 0.429±0.16 0.555±0.09 0.365±0.10 0.231±0.09 0.414±0.04 0.113±0.05 0.632±0.22 0.143±0.01 0.249±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U5 CIL_0000U5_0002 CGP 7:127382260-127393629
CIL_0000U5 CIL_0000U5_0004 CGP 7:127389673-127406822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223459 ZNF688-001 protein_coding Homo_sapiens 9e-37 159
ENST00000252797 ZNF764-001 protein_coding Homo_sapiens 0 219
ENST00000287461 ZNF689-001 protein_coding Homo_sapiens 6e-30 137
ENST00000395091 ZNF764-002 protein_coding Homo_sapiens 0 226
ENST00000395216 ZNF785-001 protein_coding Homo_sapiens 2e-24 119
ENST00000470110 ZNF785-003 protein_coding Homo_sapiens 2e-24 119
ENST00000563665 ZNF688-004 retained_intron Homo_sapiens 6e-35 152
ENST00000563707 ZNF688-005 protein_coding Homo_sapiens 1e-35 152
ENST00000567855 ZNF688-003 protein_coding Homo_sapiens 2e-37 159
ENST00000568114 AC002310.13-001 protein_coding Homo_sapiens 0 200
ENST00000568333 ZNF764-004 retained_intron Homo_sapiens 6e-30 135
ENST00000611647 ZNF689-201 protein_coding Homo_sapiens 5e-30 137

Loading