C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164853 Ccdc24-006 ENSMUSG00000078588 10090 - 4:117866524-117872229 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000164853
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000164853 4.732±3.29 5.805±0.98 4.755±1.74 2.079±0.27 4.935±1.03 0.803±0.24 1.743±0.44 6.534±4.95 10.396±1.25 0.364±0.04 10.056±3.87 1.018±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599
CIL_0001PP CIL_0001PP_0002 CGP 4:117834506-117875198

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357730 SLC6A9-002 protein_coding Homo_sapiens 0 285
ENST00000360584 SLC6A9-001 protein_coding Homo_sapiens 0 285
ENST00000372310 SLC6A9-003 protein_coding Homo_sapiens 0 484
ENST00000372318 CCDC24-001 protein_coding Homo_sapiens 0 307
ENST00000463846 CCDC24-003 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000475075 SLC6A9-005 protein_coding Homo_sapiens 0 311
ENST00000486064 CCDC24-002 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000490563 CCDC24-004 retained_intron Homo_sapiens 0 492

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