C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2 variant 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078923 Ube2v1 10090 - 2:167607638-167632095 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060645 Ube2v1-003 167607844-167631972 protein_coding
  ENSMUST00000109207 Ube2v1-001 167607638-167632095 protein_coding
  ENSMUST00000130284 Ube2v1-004 167608935-167631967 processed_transcript
  ENSMUST00000140216 Ube2v1-005 167610308-167631979 protein_coding
  ENSMUST00000144628 Ube2v1-007 167608946-167610648 retained_intron
  ENSMUST00000144830 Ube2v1-006 167617588-167631982 retained_intron
  ENSMUST00000151365 Ube2v1-002 167608766-167631987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060645ENSMUST00000109207ENSMUST00000144830ENSMUST00000151365
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060645 N/A 23.128±0.00 22.287±1.43 N/A 53.957±0.00 13.217±4.92 N/A 27.080±12.06 N/A 22.949±4.51 27.377±1.76 50.479±15.04 N/A
ENSMUST00000109207 19.771±0.09 40.448±2.24 42.141±15.42 N/A 38.584±5.38 12.305±2.54 32.465±0.00 40.014±12.85 31.214±5.32 35.727±8.55 23.368±7.27 41.439±8.53 7.988±0.00
ENSMUST00000144830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.829±0.00
ENSMUST00000151365 N/A N/A N/A 17.853±0.00 N/A N/A N/A N/A N/A N/A 29.162±1.99 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0002 VISTA 2:167024358-167627099
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_0001TN CIL_0001TN_0002 CGP 2:167538195-167632095
CIL_0007ZW CIL_0007ZW_0002 VISTA 2:167542374-168145654
CIL_0001PF CIL_0001PF_0002 CGP 2:167607638-167661496

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 ISS ubiquitin ligase complex
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0016567 IDA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0031371 IEA ubiquitin conjugating enzyme complex
GO:0031624 IPI ubiquitin conjugating enzyme binding
GO:0035370 ISS UBC13-UEV1A complex
GO:0042275 IGI error-free postreplication DNA repair
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043234 ISO protein complex
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity
GO:0070062 IEA extracellular vesicular exosome
GO:0070534 ISS protein K63-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041875 ube2v1 ubiquitin-conjugating enzyme E2 variant 1 protein_coding Danio_rerio
ENSG00000244687 UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 protein_coding Homo_sapiens

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