C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124216-ENSG00000244687 CGP 9606 20:49982999-50115959
GeneTranscriptPositionBiotype
ENSG00000124208 (TMEM189-UBE2V1)
TMEM189-UBE2V1 readthrough 		ENST00000341698 (TMEM189-UBE2V1-001) 50081124-50153637 protein_coding
ENSG00000124216 (SNAI1)
snail family zinc finger 1 		ENST00000244050 (SNAI1-001) 49982999-49988886 protein_coding
ENSG00000231265 (TRERNA1)
translation regulatory long non-coding RNA 1 		ENST00000431460 (TRERNA1-001) 50040716-50041504 lincRNA
CIL_0001TN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042821-ENSMUSG00000078923 CGP 10090 2:167538195-167632095
GeneTranscriptPositionBiotype
ENSMUSG00000042821 (Snai1)
snail family zinc finger 1 		ENSMUST00000052631 (Snai1-001) 167538195-167542814 protein_coding
ENSMUSG00000077999 (Gm23135)
predicted gene, 23135 		ENSMUST00000104806 (Gm23135-201) 167626315-167626403 miRNA
ENSMUSG00000078923 (Ube2v1)
ubiquitin-conjugating enzyme E2 variant 1 		ENSMUST00000060645 (Ube2v1-003) 167607844-167631972 protein_coding
ENSMUST00000109207 (Ube2v1-001) 167607638-167632095 protein_coding
ENSMUST00000130284 (Ube2v1-004) 167608935-167631967 processed_transcript
ENSMUST00000140216 (Ube2v1-005) 167610308-167631979 protein_coding
ENSMUST00000144628 (Ube2v1-007) 167608946-167610648 retained_intron
ENSMUST00000144830 (Ube2v1-006) 167617588-167631982 retained_intron
ENSMUST00000151365 (Ube2v1-002) 167608766-167631987 protein_coding
ENSMUSG00000081511 (Gm11475)
predicted gene 11475 		ENSMUST00000118482 (Gm11475-001) 167591395-167591870 processed_pseudogene
ENSMUSG00000089739 (Gm20431)
predicted gene 20431 		ENSMUST00000125544 (Gm20431-001) 167607850-167661496 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TN_0001ENSG00000124208ENST00000341698ENSG00000124216ENST00000244050ENSG00000231265ENST00000431460CIL_0001TN_0002ENSMUSG00000042821ENSMUST00000052631ENSMUSG00000077999ENSMUST00000104806ENSMUSG00000078923ENSMUST00000060645ENSMUST00000109207ENSMUST00000130284ENSMUST00000140216ENSMUST00000144628ENSMUST00000144830ENSMUST00000151365ENSMUSG00000081511ENSMUST00000118482ENSMUSG00000089739ENSMUST00000125544
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TN_0001ENSG00000124208ENST00000341698ENSG00000124216ENST00000244050ENSG00000231265ENST00000431460CIL_0001TN_0002ENSMUSG00000042821ENSMUST00000052631ENSMUSG00000077999ENSMUST00000104806ENSMUSG00000078923ENSMUST00000060645ENSMUST00000109207ENSMUST00000144830ENSMUST00000151365ENSMUSG00000081511ENSMUST00000118482ENSMUSG00000089739ENSMUST00000125544
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124208 ENST00000341698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.123±0.00 N/A N/A N/A
ENSG00000124216 ENST00000244050 3.417±0.00 7.533±0.00 0.330±0.00 1.164±0.00 1.562±0.99 1.441±1.33 0.641±0.00 2.045±0.00 0.577±0.42 16.022±0.00 1.169±0.00 3.853±2.38 10.590±5.39 2.137±0.56
ENSG00000231265 ENST00000431460 N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A 0.139±0.00 N/A 0.077±0.00 N/A 0.478±0.43
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042821 ENSMUST00000052631 15.276±7.69 10.013±0.58 13.661±3.44 2.092±1.58 13.564±5.52 8.073±0.79 2.538±0.78 3.786±0.65 1.188±0.53 23.242±2.92 0.577±0.14 15.925±7.27 25.351±18.98 2.317±1.14
ENSMUSG00000077999 ENSMUST00000104806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15032.900±0.00 85.104±0.00 N/A
ENSMUSG00000078923 ENSMUST00000060645 N/A N/A 23.128±0.00 22.287±1.43 N/A 53.957±0.00 13.217±4.92 N/A 27.080±12.06 N/A 22.949±4.51 27.377±1.76 50.479±15.04 N/A
ENSMUST00000109207 19.771±0.09 N/A 40.448±2.24 42.141±15.42 N/A 38.584±5.38 12.305±2.54 32.465±0.00 40.014±12.85 31.214±5.32 35.727±8.55 23.368±7.27 41.439±8.53 7.988±0.00
ENSMUST00000130284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.829±0.00
ENSMUST00000151365 N/A N/A N/A N/A 17.853±0.00 N/A N/A N/A N/A N/A N/A 29.162±1.99 N/A N/A
ENSMUSG00000081511 ENSMUST00000118482 N/A N/A 0.052±0.00 N/A 0.116±0.02 N/A 0.105±0.00 N/A N/A 0.211±0.00 N/A 0.146±0.01 N/A N/A
ENSMUSG00000089739 ENSMUST00000125544 27.515±8.87 N/A N/A 7.596±0.34 33.663±13.71 28.064±4.76 13.135±1.23 45.383±13.03 N/A 22.689±0.00 N/A N/A 29.309±0.00 32.330±2.22

Loading