C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY (sex determining region Y)-box 5, opposite strand 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000085785 Sox5os3 10090 + 6:144672868-144693834 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000139351 Sox5os3-001 144672868-144693834 antisense
  ENSMUST00000154167 Sox5os3-002 144679702-144693584 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000139351ENSMUST00000154167
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000139351 0.094±0.04 0.132±0.00 0.009±0.00 0.074±0.02 0.035±0.00 0.055±0.02 0.035±0.01 0.061±0.01 N/A 0.224±0.00 32.151±14.47
ENSMUST00000154167 N/A 0.171±0.02 0.033±0.00 0.182±0.00 N/A 0.123±0.01 0.021±0.00 0.094±0.00 0.035±0.00 0.188±0.10 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Y0 CIL_0006Y0_0003 CGP 6:143167230-144781977
CIL_0007NR CIL_0007NR_0002 UCNEbase 6:143260703-144754208
CIL_0004XB CIL_0004XB_0002 CGP 6:143828425-145076184
CIL_0008XB CIL_0008XB_0002 VISTA 6:144644642-145246014

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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