C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 6483
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087153 Gm6483 10090 + 8:19682268-19698275 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000127799 Gm6483-001 19682270-19697482 protein_coding
  ENSMUST00000133001 Gm6483-004 19682270-19697095 processed_transcript
  ENSMUST00000136929 Gm6483-005 19682270-19688220 retained_intron
  ENSMUST00000144307 Gm6483-006 19682409-19691883 retained_intron
  ENSMUST00000153710 Gm6483-002 19682268-19696502 protein_coding
  ENSMUST00000155660 Gm6483-003 19682270-19698275 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127799ENSMUST00000133001ENSMUST00000136929ENSMUST00000144307ENSMUST00000153710ENSMUST00000155660
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127799 0.918±0.36 N/A 0.952±0.12 6.619±5.49 1.009±0.04 0.537±0.00 0.373±0.23 0.626±0.03 0.525±0.18 0.989±0.00 0.166±0.04 0.601±0.28 0.731±0.40 0.457±0.00
ENSMUST00000133001 0.819±0.44 0.451±0.06 0.774±0.00 4.497±3.98 0.577±0.01 0.917±0.17 0.286±0.01 0.526±0.20 0.742±0.30 1.348±0.28 0.183±0.05 1.175±0.46 1.073±0.70 0.665±0.07
ENSMUST00000136929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.727±0.00
ENSMUST00000144307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.816±0.00 N/A 0.764±0.00
ENSMUST00000153710 1.054±0.00 N/A 0.966±0.34 2.845±0.00 N/A N/A 0.407±0.09 N/A 0.532±0.09 1.109±0.00 0.438±0.08 N/A 0.517±0.21 0.283±0.09
ENSMUST00000155660 4.709±1.87 4.080±1.00 3.519±0.21 6.469±3.37 4.713±1.92 5.651±0.75 1.857±0.76 3.306±1.89 2.731±0.80 6.756±2.08 0.952±0.17 8.099±3.06 2.477±1.28 1.896±0.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075960 protein_coding Danio_rerio
ENSDARG00000077996 protein_coding Danio_rerio

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