C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6483
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153710 Gm6483-002 ENSMUSG00000087153 10090 + 8:19682268-19696502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartLiverLungMusclePlacentaTestisENSMUST00000153710
Transcript ID Adipose Bladder Brain Heart Liver Lung Muscle Placenta Testis
ENSMUST00000153710 1.054±0.00 0.966±0.34 2.845±0.00 0.407±0.09 0.532±0.09 1.109±0.00 0.438±0.08 0.517±0.21 0.283±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268603 CDH11-001 protein_coding Homo_sapiens 0 917
ENST00000299345 CDH8-013 protein_coding Homo_sapiens 4.99997e-41 174
ENST00000394156 CDH11-002 protein_coding Homo_sapiens 0 917
ENST00000562325 CDH11-017 protein_coding Homo_sapiens 8e-27 124
ENST00000562712 CDH11-010 protein_coding Homo_sapiens 1e-30 137
ENST00000562882 CDH11-016 protein_coding Homo_sapiens 7e-27 124
ENST00000562998 CDH11-015 protein_coding Homo_sapiens 0 195
ENST00000564317 CDH11-007 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000566827 CDH11-004 protein_coding Homo_sapiens 0 704
ENST00000567934 CDH11-003 protein_coding Homo_sapiens 0 725
ENST00000569624 CDH11-018 processed_transcript Homo_sapiens 0 215
ENST00000577390 CDH8-001 protein_coding Homo_sapiens 9.99995e-41 174
ENST00000577730 CDH8-012 protein_coding Homo_sapiens 9.99995e-41 174
ENST00000583382 CDH8-011 protein_coding Homo_sapiens 1.99993e-41 174
ENST00000584337 CDH8-003 protein_coding Homo_sapiens 4.99997e-41 174
ENST00000585315 CDH8-014 nonsense_mediated_decay Homo_sapiens 9.99995e-41 174

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