C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6483
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127799 Gm6483-001 ENSMUSG00000087153 10090 + 8:19682270-19697482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127799
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127799 0.918±0.36 0.952±0.12 6.619±5.49 1.009±0.04 0.537±0.00 0.373±0.23 0.626±0.03 0.525±0.18 0.989±0.00 0.166±0.04 0.601±0.28 0.731±0.40 0.457±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268603 CDH11-001 protein_coding Homo_sapiens 0 704
ENST00000299345 CDH8-013 protein_coding Homo_sapiens 4.99997e-41 174
ENST00000394156 CDH11-002 protein_coding Homo_sapiens 0 704
ENST00000562325 CDH11-017 protein_coding Homo_sapiens 3e-26 122
ENST00000562712 CDH11-010 protein_coding Homo_sapiens 3e-26 122
ENST00000562882 CDH11-016 protein_coding Homo_sapiens 3e-26 122
ENST00000562998 CDH11-015 protein_coding Homo_sapiens 7e-27 124
ENST00000564317 CDH11-007 protein_coding Homo_sapiens 3e-26 122
ENST00000566827 CDH11-004 protein_coding Homo_sapiens 0 704
ENST00000567934 CDH11-003 protein_coding Homo_sapiens 0 512
ENST00000569624 CDH11-018 processed_transcript Homo_sapiens 3e-26 122
ENST00000577390 CDH8-001 protein_coding Homo_sapiens 9.99995e-41 174
ENST00000577730 CDH8-012 protein_coding Homo_sapiens 9.99995e-41 174
ENST00000583382 CDH8-011 protein_coding Homo_sapiens 1.99993e-41 174
ENST00000584337 CDH8-003 protein_coding Homo_sapiens 4.99997e-41 174
ENST00000585315 CDH8-014 nonsense_mediated_decay Homo_sapiens 9.99995e-41 174

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