C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LIM homeobox 1, opposite strand
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087211 Lhx1os 10090 + 11:84525660-84535831 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000126072 Lhx1os-003 84525669-84535831 lincRNA
  ENSMUST00000128121 Lhx1os-001 84525684-84535830 lincRNA
  ENSMUST00000134800 Lhx1os-002 84525660-84535831 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyOvaryPlacentaTestisENSMUST00000126072ENSMUST00000128121ENSMUST00000134800
Transcript ID Brain Kidney Ovary Placenta Testis
ENSMUST00000126072 N/A 0.859±0.00 N/A 0.063±0.00 0.068±0.00
ENSMUST00000128121 0.280±0.00 1.842±0.00 N/A 0.050±0.00 0.247±0.09
ENSMUST00000134800 0.711±0.00 5.824±1.15 0.264±0.01 0.132±0.03 0.397±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GS CIL_0008GS_0002 VISTA 11:84076005-84677109
CIL_0008DP CIL_0008DP_0002 VISTA 11:84095730-84696774
CIL_00085M CIL_00085M_0002 VISTA 11:84181126-84782244
CIL_00085Q CIL_00085Q_0002 VISTA 11:84196288-84796920
CIL_0007ND CIL_0007ND_007N UCNEbase 11:84271978-84766400
CIL_0007YB CIL_0007YB_0004 VISTA 11:84425827-85026602
CIL_00085R CIL_00085R_0002 VISTA 11:84466073-85066769

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

Loading