C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ceramide synthase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087408 Cers1 10090 + 8:70315775-70331592 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000136257 Cers1-002 70318350-70322689 retained_intron
  ENSMUST00000140239 Cers1-001 70315787-70331587 protein_coding
  ENSMUST00000165819 Cers1-201 70315775-70331592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastMuscleOvaryENSMUST00000140239ENSMUST00000165819
Transcript ID Adipose Brain Breast Muscle Ovary
ENSMUST00000140239 2.964±0.12 15.800±4.48 3.502±0.00 9.278±2.24 5.538±0.73
ENSMUST00000165819 N/A 9.365±2.00 N/A 5.068±0.00 5.037±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GF CIL_0003GF_0002 CGP 8:70315775-70331592

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005125 IEA cytokine activity
GO:0005576 TAS extracellular region
GO:0005615 IEA extracellular space
GO:0008083 IEA growth factor activity
GO:0016021 IEA integral component of membrane
GO:0040007 IEA growth
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0046513 IDA ceramide biosynthetic process
GO:0050291 IDA sphingosine N-acyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037995 dvr1 decapentaplegic and Vg-related 1 protein_coding Danio_rerio
ENSG00000130283 GDF1 growth differentiation factor 1 protein_coding Homo_sapiens
ENSG00000223802 CERS1 ceramide synthase 1 protein_coding Homo_sapiens

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