C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ceramide synthase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000223802 CERS1 9606 - 19:18868545-18896727 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000429504 CERS1-002 18877909-18896135 protein_coding
  ENST00000542296 CERS1-001 18877911-18896727 protein_coding
  ENST00000596048 CERS1-004 18877917-18884233 protein_coding
  ENST00000623882 CERS1-005 18868545-18896096 protein_coding
  ENST00000623927 CERS1-201 18868552-18896144 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000429504ENST00000542296ENST00000596048ENST00000623882ENST00000623927
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000429504 0.200±0.00 0.237±0.00 N/A 13.018±7.75 0.086±0.00 0.665±0.00 0.088±0.00 0.058±0.00 0.101±0.00 0.499±0.00 N/A 1.855±0.60 0.338±0.09 3.505±0.13
ENST00000542296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.985±0.86
ENST00000596048 N/A N/A 0.132±0.00 15.027±10.15 0.269±0.00 0.400±0.00 N/A N/A 0.057±0.00 N/A 0.429±0.00 2.580±0.00 N/A 9.107±5.27
ENST00000623882 0.112±0.00 0.112±0.00 N/A 34.390±0.00 0.353±0.00 0.441±0.34 0.226±0.00 0.076±0.00 N/A N/A 1.104±1.04 0.525±0.00 0.141±0.03 N/A
ENST00000623927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.539±0.00 0.170±0.00 3.905±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GF CIL_0003GF_0001 CGP 19:18868545-18896727

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005125 IEA cytokine activity
GO:0005615 IEA extracellular space
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006665 TAS sphingolipid metabolic process
GO:0008083 IEA growth factor activity
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0030148 IDA sphingolipid biosynthetic process
GO:0035690 IDA cellular response to drug
GO:0036146 IDA cellular response to mycotoxin
GO:0040007 IEA growth
GO:0043231 ISS intracellular membrane-bounded organelle
GO:0044281 TAS small molecule metabolic process
GO:0046513 ISS ceramide biosynthetic process
GO:0050291 ISS sphingosine N-acyltransferase activity
GO:0051974 IDA negative regulation of telomerase activity
GO:0071492 IDA cellular response to UV-A
GO:0072721 IDA cellular response to dithiothreitol

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037995 dvr1 decapentaplegic and Vg-related 1 protein_coding Danio_rerio
ENSMUSG00000055694 Gdf1 growth differentiation factor 1 protein_coding Mus_musculus
ENSMUSG00000087408 Cers1 ceramide synthase 1 protein_coding Mus_musculus

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