C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003GF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130283-ENSG00000223802 CGP 9606 19:18868545-18896727
GeneTranscriptPositionBiotype
ENSG00000223802 (CERS1)
ceramide synthase 1
ENST00000429504 (CERS1-002) 18877909-18896135 protein_coding
ENST00000542296 (CERS1-001) 18877911-18896727 protein_coding
ENST00000596048 (CERS1-004) 18877917-18884233 protein_coding
ENST00000623882 (CERS1-005) 18868545-18896096 protein_coding
ENST00000623927 (CERS1-201) 18868552-18896144 protein_coding
ENSG00000269694 (AC005197.2)
ENST00000597769 (AC005197.2-001) 18881680-18883376 antisense
CIL_0003GF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000087408-ENSMUSG00000087408 CGP 10090 8:70315775-70331592
GeneTranscriptPositionBiotype
ENSMUSG00000058301 (Upf1)
UPF1 regulator of nonsense transcripts homolog (yeast)
ENSMUST00000075666 (Upf1-201) 70331522-70353273 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GF_0001ENSG00000223802ENST00000429504ENST00000542296ENST00000596048ENST00000623882ENST00000623927ENSG00000269694ENST00000597769CIL_0003GF_0002ENSMUSG00000058301ENSMUST00000075666
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GF_0001ENSG00000223802ENST00000429504ENST00000542296ENST00000596048ENST00000623882ENST00000623927ENSG00000269694ENST00000597769CIL_0003GF_0002ENSMUSG00000058301ENSMUST00000075666
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000223802 ENST00000429504 0.200±0.00 0.237±0.00 N/A 13.018±7.75 0.086±0.00 0.665±0.00 0.088±0.00 0.058±0.00 0.101±0.00 0.499±0.00 N/A 1.855±0.60 0.338±0.09 3.505±0.13
ENST00000542296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.985±0.86
ENST00000596048 N/A N/A 0.132±0.00 15.027±10.15 0.269±0.00 0.400±0.00 N/A N/A 0.057±0.00 N/A 0.429±0.00 2.580±0.00 N/A 9.107±5.27
ENST00000623882 0.112±0.00 0.112±0.00 N/A 34.390±0.00 0.353±0.00 0.441±0.34 0.226±0.00 0.076±0.00 N/A N/A 1.104±1.04 0.525±0.00 0.141±0.03 N/A
ENST00000623927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.539±0.00 0.170±0.00 3.905±0.00
ENSG00000269694 ENST00000597769 0.065±0.00 0.169±0.00 N/A 1.076±0.86 0.186±0.00 0.019±0.00 0.020±0.00 0.145±0.00 0.018±0.00 N/A N/A 0.150±0.02 N/A 0.808±0.69
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000058301 ENSMUST00000075666 12.874±5.16 26.682±2.36 11.980±2.76 12.767±2.98 19.689±4.27 22.540±2.66 3.739±2.17 11.258±1.33 10.074±3.04 17.375±2.80 2.187±0.60 16.821±5.70 13.298±8.40 11.236±4.84

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