C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA C030037D09 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000087574 C030037D09Rik 10090 + 11:88718645-88728893 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000125967 C030037D09Rik-003 88720489-88724173 lincRNA
  ENSMUST00000136201 C030037D09Rik-002 88718804-88728893 lincRNA
  ENSMUST00000138007 C030037D09Rik-001 88718645-88722600 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125967ENSMUST00000136201ENSMUST00000138007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125967 N/A N/A N/A N/A N/A 2.969±0.00 N/A N/A N/A N/A N/A N/A 0.353±0.00 N/A
ENSMUST00000136201 N/A 1.099±0.15 1.090±0.06 0.934±0.38 0.662±0.09 0.889±0.00 1.569±0.40 1.110±0.16 0.491±0.06 0.680±0.03 0.931±0.40 0.722±0.02 0.304±0.17 22.063±0.91
ENSMUST00000138007 1.236±0.40 2.310±0.41 0.592±0.01 0.388±0.11 0.722±0.31 1.408±0.30 0.901±0.47 1.352±0.84 0.458±0.22 2.113±0.51 0.109±0.04 2.371±1.07 0.157±0.11 9.837±5.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R8 CIL_0007R8_0002 VISTA 11:88167358-88768721
CIL_0008GV CIL_0008GV_0002 VISTA 11:88227850-88829479
CIL_000880 CIL_000880_0002 VISTA 11:88254791-88855816
CIL_00039S CIL_00039S_0002 CGP 11:88339382-88864586

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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