C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 5 (inositol transporters), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089774 Slc5a3 10090 + 16:92058322-92087473 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113975 Slc5a3-001 92058322-92087473 protein_coding
  ENSMUST00000131098 Slc5a3-002 92078062-92083808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113975
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113975 8.029±2.54 4.012±0.64 0.763±0.24 2.179±0.91 4.413±1.20 3.593±0.43 0.644±0.04 10.389±2.25 0.469±0.11 1.262±0.14 0.224±0.03 3.346±0.86 3.677±1.12 1.481±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ON CIL_0008ON_0002 VISTA 16:92040534-92642015
CIL_0007SX CIL_0007SX_0002 VISTA 16:92042784-92648394
CIL_0008OM CIL_0008OM_0002 VISTA 16:92044467-92645647
CIL_000789 CIL_000789_0002 CGP 16:92058270-92112227
CIL_000788 CIL_000788_0002 CGP 16:92058322-92298129

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006020 IMP inositol metabolic process
GO:0006814 IEA sodium ion transport
GO:0007422 IMP peripheral nervous system development
GO:0015293 IEA symporter activity
GO:0015798 IMP myo-inositol transport
GO:0016021 IEA integral component of membrane
GO:0043576 IMP regulation of respiratory gaseous exchange
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010376 SLC5A3 (1 of 2) solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 protein_coding Danio_rerio
ENSDARG00000077812 SLC5A3 (2 of 2) solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 protein_coding Danio_rerio
ENSG00000198743 SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 protein_coding Homo_sapiens

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