C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700028K03 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000089798 1700028K03Rik 10090 + 5:107508944-107551549 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058921 1700028K03Rik-001 107534709-107548377 protein_coding
  ENSMUST00000159902 1700028K03Rik-005 107534737-107549214 protein_coding
  ENSMUST00000160160 1700028K03Rik-002 107508944-107551549 protein_coding
  ENSMUST00000162591 1700028K03Rik-004 107534757-107549022 retained_intron
  ENSMUST00000163064 1700028K03Rik-003 107534720-107551542 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000160160
Transcript ID Breast
ENSMUST00000160160 0.956±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DI CIL_0008DI_0002 VISTA 5:106921760-107524214
CIL_0008YV CIL_0008YV_0002 VISTA 5:106950899-107552442
CIL_0005ZT CIL_0005ZT_0002 CGP 5:107437997-107580596
CIL_0005ZU CIL_0005ZU_0002 CGP 5:107497378-107580596
CIL_0007CA CIL_0007CA_0003 CGP 5:107508944-107597888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075814 C6H1orf146 chromosome 1 open reading frame 146 protein_coding Danio_rerio
ENSG00000203910 C1orf146 chromosome 1 open reading frame 146 protein_coding Homo_sapiens

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