C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin A-52 residue ribosomal protein fusion product 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090137 Uba52 10090 - 8:70508263-70510801 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081940 Uba52-005 70508266-70510417 protein_coding
  ENSMUST00000124967 Uba52-006 70508430-70509945 protein_coding
  ENSMUST00000125184 Uba52-001 70508263-70510581 protein_coding
  ENSMUST00000127793 Uba52-007 70508264-70510379 retained_intron
  ENSMUST00000129909 Uba52-003 70508263-70510355 protein_coding
  ENSMUST00000135446 Uba52-002 70508328-70510801 protein_coding
  ENSMUST00000140679 Uba52-004 70508263-70510350 protein_coding
  ENSMUST00000165126 Uba52-201 70508332-70509623 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081940ENSMUST00000125184ENSMUST00000129909ENSMUST00000165126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081940 N/A N/A 333.412±0.00 N/A N/A N/A 110.125±0.00 N/A 422.889±30.49 N/A N/A 293.296±0.00 345.214±34.32 N/A
ENSMUST00000125184 336.503±117.37 N/A 388.326±35.52 392.286±37.39 172.988±1.53 298.098±59.60 228.771±61.90 374.067±119.46 368.265±116.33 164.465±7.94 103.754±15.92 239.909±41.69 211.163±138.37 373.576±169.05
ENSMUST00000129909 N/A 240.811±36.27 N/A N/A 155.621±3.33 N/A N/A N/A N/A N/A N/A 198.831±29.12 90.242±0.00 N/A
ENSMUST00000165126 N/A N/A N/A N/A 801.747±258.38 1228.017±166.48 417.154±25.28 689.021±8.18 N/A 445.219±43.67 324.891±34.70 987.072±394.13 1049.402±849.14 99.401±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041435 uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 protein_coding Danio_rerio

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