C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin A-52 residue ribosomal protein fusion product 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125184 Uba52-001 ENSMUSG00000090137 10090 - 8:70508263-70510581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125184
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125184 336.503±117.37 388.326±35.52 392.286±37.39 172.988±1.53 298.098±59.60 228.771±61.90 374.067±119.46 368.265±116.33 164.465±7.94 103.754±15.92 239.909±41.69 211.163±138.37 373.576±169.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000035235 UBC-001 protein_coding Danio_rerio 0 294
ENSDART00000123908 UBC-201 protein_coding Danio_rerio 0 281
ENSDART00000099105 ubc-001 protein_coding Danio_rerio 0 270
ENSDART00000097583 ubb-001 protein_coding Danio_rerio 0 270
ENST00000339647 UBC-001 protein_coding Homo_sapiens 0 303
ENST00000408928 AC099535.4-001 processed_pseudogene Homo_sapiens 0 398
ENST00000461723 UBA52P5-001 processed_pseudogene Homo_sapiens 0 196
ENST00000535131 UBC-015 protein_coding Homo_sapiens 0 303
ENST00000535859 UBC-013 protein_coding Homo_sapiens 0 303
ENST00000536661 UBC-010 processed_transcript Homo_sapiens 0 244
ENST00000536769 UBC-007 protein_coding Homo_sapiens 0 303
ENST00000538617 UBC-003 protein_coding Homo_sapiens 0 303
ENST00000540351 UBC-009 protein_coding Homo_sapiens 0 303
ENST00000540700 UBC-011 protein_coding Homo_sapiens 0 303
ENST00000541272 UBC-016 protein_coding Homo_sapiens 0 303
ENST00000541645 UBC-014 protein_coding Homo_sapiens 0 303
ENST00000542416 UBC-008 protein_coding Homo_sapiens 0 254
ENST00000544481 UBC-017 processed_transcript Homo_sapiens 0 294
ENST00000546120 UBC-201 protein_coding Homo_sapiens 0 303
ENST00000546271 UBC-012 protein_coding Homo_sapiens 0 303

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