C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 20458
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090996 Gm20458 10090 + 2:164460967-164490760 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000164863 Gm20458-001 164460967-164490760 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164863
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164863 25.996±3.14 21.249±0.60 22.453±0.00 26.732±1.57 38.002±6.36 12.839±1.33 20.973±2.78 8.387±1.90 30.593±3.18 5.520±0.00 50.066±6.91 12.385±2.62 9.841±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L6 CIL_0003L6_0002 CGP 2:164460967-164490760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017606 sys1 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000254806 SYS1-DBNDD2 SYS1-DBNDD2 readthrough (NMD candidate) protein_coding Homo_sapiens

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