C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20458
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164863 Gm20458-001 ENSMUSG00000090996 10090 + 2:164460967-164490760 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000164863
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000164863 25.996±3.14 21.249±0.60 22.453±0.00 26.732±1.57 38.002±6.36 12.839±1.33 20.973±2.78 8.387±1.90 30.593±3.18 5.520±0.00 50.066±6.91 12.385±2.62 9.841±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L6 CIL_0003L6_0002 CGP 2:164460967-164490760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243918 SYS1-001 protein_coding Homo_sapiens 0 337
ENST00000357275 DBNDD2-004 protein_coding Homo_sapiens 0 573
ENST00000360981 DBNDD2-002 protein_coding Homo_sapiens 0 571
ENST00000372710 DBNDD2-010 protein_coding Homo_sapiens 0 571
ENST00000372712 DBNDD2-006 protein_coding Homo_sapiens 0 571
ENST00000372717 DBNDD2-008 protein_coding Homo_sapiens 0 315
ENST00000372720 DBNDD2-001 protein_coding Homo_sapiens 0 571
ENST00000372722 DBNDD2-003 protein_coding Homo_sapiens 0 315
ENST00000372723 DBNDD2-005 protein_coding Homo_sapiens 0 571
ENST00000372727 SYS1-005 protein_coding Homo_sapiens 0 337
ENST00000414310 SYS1-002 protein_coding Homo_sapiens 0 316
ENST00000419593 SYS1-DBNDD2-001 nonsense_mediated_decay Homo_sapiens 0 905
ENST00000426004 SYS1-006 protein_coding Homo_sapiens 0 337
ENST00000443296 DBNDD2-012 protein_coding Homo_sapiens 0 315
ENST00000452133 SYS1-DBNDD2-003 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000453003 SYS1-003 protein_coding Homo_sapiens 0 337
ENST00000457307 SYS1-007 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000458187 SYS1-DBNDD2-002 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000461890 SYS1-009 retained_intron Homo_sapiens 0 339
ENST00000475242 SYS1-DBNDD2-004 processed_transcript Homo_sapiens 0 483

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