C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SYS1-DBNDD2 readthrough (NMD candidate)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000254806 SYS1-DBNDD2 9606 + 20:45363200-45410610 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000419593 SYS1-DBNDD2-001 45363200-45410610 nonsense_mediated_decay
  ENST00000452133 SYS1-DBNDD2-003 45363510-45410068 nonsense_mediated_decay
  ENST00000458187 SYS1-DBNDD2-002 45363502-45409997 nonsense_mediated_decay
  ENST00000475242 SYS1-DBNDD2-004 45363216-45410007 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENST00000419593ENST00000475242
Transcript ID Ovary Placenta
ENST00000419593 N/A 8.114±0.00
ENST00000475242 100.288±0.00 27.174±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L6 CIL_0003L6_0001 CGP 20:45363200-45410610

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017606 sys1 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000090996 Gm20458 predicted gene 20458 protein_coding Mus_musculus

Loading