C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 28062
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000100725 HNRNPU 10090 - 1:178323074-178337728 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000161769 HNRNPU-001 178323074-178337728 nonsense_mediated_decay
  ENSMUST00000188044 HNRNPU-002 178323134-178330621 nonsense_mediated_decay
  ENSMUST00000189450 HNRNPU-003 178323620-178329407 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161769
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161769 23.304±11.61 49.712±2.08 84.744±32.32 13.544±3.31 18.972±5.89 12.078±1.11 19.253±2.18 70.640±59.03 31.174±2.43 18.969±2.67 63.586±58.81 141.345±86.70 131.556±87.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004735 hnrnpub heterogeneous nuclear ribonucleoprotein Ub protein_coding Danio_rerio
ENSDARG00000015206 hnrnpua heterogeneous nuclear ribonucleoprotein Ua protein_coding Danio_rerio
ENSG00000153187 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) protein_coding Homo_sapiens

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