C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4933400F21 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000102009 RP23-205B8.2 10090 - 1:89650529-89683908 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000186098 RP23-205B8.2-001 89650529-89683908 antisense
  ENSMUST00000187011 RP23-205B8.2-003 89681085-89683888 retained_intron
  ENSMUST00000187295 RP23-205B8.2-002 89677487-89683894 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000186098ENSMUST00000187011ENSMUST00000187295
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000186098 N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A 0.044±0.00 N/A N/A
ENSMUST00000187011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.244±0.00
ENSMUST00000187295 0.088±0.03 0.057±0.04 0.026±0.00 0.109±0.11 0.077±0.03 0.067±0.02 0.063±0.03 0.075±0.00 0.036±0.02 0.271±0.03 0.019±0.00 0.052±0.04 0.057±0.03 4.764±2.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R3 CIL_0003R3_0002 CGP 1:89070415-89897617
CIL_0007U0 CIL_0007U0_0002 VISTA 1:89413750-90014911
CIL_0003RE CIL_0003RE_0002 CGP 1:89454806-89931179
CIL_0007RK CIL_0007RK_0002 VISTA 1:89547708-90149945
CIL_0008K4 CIL_0008K4_0002 VISTA 1:89625517-90226000

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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